UFO09034.5prime Sequence
1124 bp (1026 high quality bases) assembled on 2011-08-10
> UFO09034.5prime
CAGTCGACATGGCAGAACCAATAGAAGGCGAACAGGAGGAAAAGCCTCCG
CCATCGAGGGCAAAGCGAATCACCTATCTGGTACTCCATGTGCTGCTCCA
TATCATATTCATATCTTACTTTACGGCAGCCACAATCATTTTCATCTTTT
ACGACAAGGATTCCAAAGAATGCTGGCCCAATAGGGGCTCGGAAGCCACA
ACCGAATCGATAGATAACTCAACCGAAGATGATGATGATGATGATTATGA
CACAGAAGAAACTTCTGAGAAGCCAGTGCCAGAGGTTAAGCCAAAACTAT
TGTGCCAAATTAACTGGTGTCATGGATACGGGTTTCTCATCGTCTTGTTC
ATCTTGTTTTATATCCTATGGCTGTACTACTGGGTATTTAAGCCATTCGT
GGGCATCAAGCTGTATAATAACTACCTGGAACCAGTGATTGACAAATGGA
TTGCGTTTAGTCGCCAGTGGATAGTGTCCGGCGTAATGCTGGCGATTGTG
CTCGCTGTGGTGGTGGCATACCTCGGATTCGAGTGCCGCAATGACGCATA
CAAGGCCATCGGACTGCTCGGACCTGTGTGCTTTGTCCTTATCGGATTCG
CCGTGTCCAAGCACCACTTGCAAGTACCTTGGCGCATAGTGACCCACGGT
CTCCTGGGACAGCTGCTGCTGGGCATACTCTGCCTGCGCCTCCCCTTTGG
CCGGTCCATCTTTCAATGCCTTGGGGACAAGGTGACGATATTTCTGAACT
ACGCACAGCACGGAGCACGCTTTGTGTACGGGGATCGCATTTGCGATGAG
TACGTCTTTGCATTTGCCATACTGGCGGTGGTGTTCTTCTTCAGCGTGAT
CACCAGCATTATGTATTACCTTGGCTGGATGCAGTTCATCCTGAACGGGT
TTTGGGTTCCTCTTGCAGGCCATGGTGGCACCACCGTTTGCGAAAGTGTA
AATGCAGCGGGCACGTGTTTCTAAGCATGACCGAAAGCCCTCTGGTCATC
GGACGTACATCGAAATACTGACCGTCAGCGGTGCACGCTAATTGCACCTC
AGCTACGCGACAGTACAGTACTGTCTTGGGGCTTATGGTCTCGGCCTCCG
CAGCTTCCTATCCCAACCAGGAAT
UFO09034.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:50:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CNT1-RB | 2819 | CG11778-RB | 80..1166 | 9..1087 | 5095 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:50:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9083211..9083811 | 469..1064 | 2605 | 97.8 | Plus |
| 2R | 25286936 | 2R | 9082669..9082986 | 153..470 | 1590 | 100 | Plus |
| 2R | 25286936 | 2R | 9082474..9082618 | 9..153 | 725 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:50:32 has no hits.
UFO09034.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:16:51 Download gff for
UFO09034.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11778-RB | 32..1128 | 1..1090 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:00:31 Download gff for
UFO09034.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CNT1-RB | 74..1170 | 1..1090 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:49:30 Download gff for
UFO09034.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CNT1-RB | 74..1170 | 1..1090 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:49:30 Download gff for
UFO09034.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9082468..9082618 | 1..153 | 97 | -> | Plus |
| 2R | 9082670..9082985 | 154..469 | 100 | -> | Plus |
| 2R | 9083212..9083841 | 470..1090 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:00:31 Download gff for
UFO09034.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4969973..4970123 | 1..153 | 97 | -> | Plus |
| arm_2R | 4970175..4970490 | 154..469 | 100 | -> | Plus |
| arm_2R | 4970717..4971346 | 470..1090 | 97 | | Plus |
