UFO09041.5prime Sequence
1134 bp (1031 high quality bases) assembled on 2011-08-10
> UFO09041.5prime
CAGTCGACATGTACCAGCCGCCTTTGCCACCGCCTCCAGTCCAGCCTGCT
CCTCCGCCCCCGCCACCTCCGCCAGAAGAAGATCTATCTCCACCGGGAGT
AGGTGTTCCCTCTCACAACTATTCTTCAAATGAATCCCATTCTCAGAGCT
CGAAGTCTTTGGATTACGTCTACCCGGAGACACCGGCTCCTTATGCCAGC
TCAGTACCTAGCTATGATCCGTACCAGCAACCACCAGCGTACGGCTACGA
GGGATATGCTTACAACGAACAAGCACAGAAGTATGGTGGCCAGGAGTCCC
ATTACCAATACCAGTACCCGGCATCCGGATCATCATTCCTCTATGAAAGC
TATAAATACCCAGACCGCTATCCTGCTTATTCGTCCAACTACCGACCTCC
ATCCGAAAGGCAGAGGTACACTTCCAACAGCTCCAGTCAAGGCTACCACC
ATTATCCCGGCTATAGCTCGGGTAGGCGGTATGAACAAAGACATGATCAG
GAACACCGTCAAATTCAGGACAGTCGATATGCCCACGAGCCACGACACGG
ACACTATGCCCACAGGCAGGCAAAGGGGTCGCAACACGGATACTATGGAT
CTGCAGCCAGAAACCAAGTCAGCGATGACTATTCGCCACGTGGCCATCAC
GAAAGGGAGAGAAATGAGACCTTAGAGAAGACTAGGGCCAAACCGAAGGT
GGAGACCGAAAGGGACCGTCTGTTGAGACAGTGGTGTTCTAACTTCTGCG
AAAAACCAGAGGACTATGTGAAGAAGATGAACGCCCTCAGCGAGGCGGAT
GCGCCAGTCGAATCCTGGGTGCGATCATCGCCAGCGGAGCTCTACTACGA
GCGCACCAAGAGCGAAAACGAAGTCAGAGGTCGGGCGCGTCTGCAAAGCT
GTGCACTCTATTCGATGAGGAGCTCCTGCAGAGAGCAAAGCGTGTACGCG
AGAGCTACCCGTTTACGTGCCGCCTCCAGAAGGCCCCGCCGCCGTGTTTG
CAAGCATAAACACCAGGTCGGAGGCCTGCTCCTCGTCCTCCTCATCCGAT
GGACGACCCCGACGGAGACGCTTTTAAGATCGGAACCAAGAACTGCCTGC
ATGGGAGGAGCCTTCCCGGCAAGGTTCCACATCC
UFO09041.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:51:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| drosha-RA | 4290 | CG8730-RA | 83..1208 | 4..1134 | 5210 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:51:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7932511..7933590 | 4..1082 | 5040 | 98.8 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:51:49 has no hits.
UFO09041.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:17:02 Download gff for
UFO09041.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| drosha-RA | 82..1183 | 1..1104 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:01:10 Download gff for
UFO09041.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| drosha-RA | 79..1180 | 1..1104 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:50:00 Download gff for
UFO09041.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| drosha-RA | 79..1180 | 1..1104 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:50:00 Download gff for
UFO09041.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7932507..7933608 | 1..1104 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:01:10 Download gff for
UFO09041.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3820012..3821113 | 1..1104 | 98 | | Plus |
