UFO09047.5prime Sequence
1123 bp (1016 high quality bases) assembled on 2011-08-10
> UFO09047.5prime
CAGTCGACATGCATTCAGTGTTGCCGTTGATGTATCGTAGAAGGAGTTCC
CATCTGAAGGCCCTCCAATGGACGATCCAGTCGAGCCAGAATTTCTTCAA
GATGAGCTTCAAAGCGCCATCGATAAAAGTGCCTAAGGCTGCCGCCATTA
AGGAATTGGCCAATAAACCAACGCAACCCCAGTCTCAGCCCTCGCAATCG
CAGTCTTCGGCAACACAACCAACTCAACCGCCTCAGCAAGCGGAAATCAA
AAAGAATCCTTTGACAATGGGCGCCATTAGCCCCGCACCACCCACTCCCA
TTAGCCCAAAACCCTCAGTTCAACCAAAAATCCCAGATCAGCGGGCCAAG
TGGATGGCCAAGGTTTCTCCGGAATCGCAGAGAAAAGCGAAATTGGCAGC
TGCAGGAGGTTCTCCGCCTTCCGGTCCACCAAAGAACCAGTTTAGCCAAG
CAAATAATCCCAGTTTCGCGATGCCCGGTCAAAGTTCGCCTGCAAACTTT
AGTGCTGCACCTAAAACTCAAGCCTCCTGGCAGCAAAAGGTGGAAAAATC
TGCGGAAAATGAAGATTCCGGTGCATTCAAGGGTGCCTCTTCTGAGTCTC
AACGAAAAAACTGGATGAACCGCATGCAGGGATCGCAACAAAGGAAACAG
AATCAGTGGCTGAAAGAGATGCAGGCCAAACAGCAGGCTGGCAAGGATAT
TCAGGCACAGAAGATGCAGAAAATGGAGTCTCAAAAGGCCACGACGACCC
CAGCTGCACCACCTAAAGAAGCGGCTCCATCCACTCCACAACCGGCCGAA
AAGCCCGAAGAAAAGAGTCCAGAACATTTGGCATACTTAGATGCGATCAA
GCAACTGAATAGCTATCAGTTTTGGAACCCACTTCCGGCAGAGCCACCAC
CAAGAGCAGTAGAAAGGACAGGATCCGGTTATCGAGCAAACTTTGGAGTG
CCTGAAAAGTCGGGTCTTACGAAAAAGGATCTGATGCCATACCCGTAATA
CAGGTAGCCGGTTCCAAAGACGGGCTCACGGTGTGCATCGTGGGAGAGTA
TTCCTCGTGTCATGGGGTGAAACTGATGTTCTTCTTCCTCCGCCGCCACT
GTTTACAGCGAAGTAGATCGACG
UFO09047.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:51:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31773-RA | 2493 | CG31773-RA | 109..1209 | 9..1104 | 5095 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:51:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3913166..3914180 | 1019..9 | 4860 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:51:21 has no hits.
UFO09047.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:16:58 Download gff for
UFO09047.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31773-RA | 109..1201 | 9..1096 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:00:54 Download gff for
UFO09047.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31773-RA | 109..1201 | 9..1096 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:49:49 Download gff for
UFO09047.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31773-RA | 109..1201 | 9..1096 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:49:49 Download gff for
UFO09047.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3913106..3914180 | 9..1075 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:00:54 Download gff for
UFO09047.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3913106..3914180 | 9..1075 | 98 | | Minus |
