UFO09050.5prime Sequence
1142 bp (1024 high quality bases) assembled on 2011-08-10
> UFO09050.5prime
CAGTCGACATGGATCCGGAGAACTTAGAGGTGGGACAAAATTATGAAGGT
TCCCAGGAATTCGATGAGAGCAGCACCAGCTCAATTAGCAACAAGGGCCC
GGATGACAGTCAATTCAAGCGTGAGGCTGAGAAAGCTATTTGCATCATGC
CGCCCCGACCGGGAACGACTATGATGAACTATCAGGAGCTATATATTCCG
CGGAATCAGCTTACTGATGTATATTACCCCATTCAGGAGGCCCAACGATG
GCTCACTCTGATGGACAAGATGGGCAAGGCACACCGTTTTCCGCTGCCCA
CGATCCTGCCGAAAGTGATCCAGACCCGCTACGTGCCAAAGCGGCATCTT
CCAAAGGACGTCGAAGTGGATCGGAGGCGTCGTCAGTACCAGAAGATTAA
CTTGGTGAATGAGCTGGCCAAGGCGGGCCTCACTGACGACGTGCTGCAGC
CCACCGAGGAGCAGTATAATGTAATGTCCGAGTTCGCCTTCCCACACAAG
TTTCCCCTGAGCTACTTCGACGACAGCAACTTTGACATCAACTCTCCGGC
GGCCTGGTTTGAGCTGGGAGTTGTCGGAGATGCGCACTACCCGCTTCCGG
CGAAGGCGTACCTGCCTTACAACCAAAGCCTGCTGAACTGCCAGTGGGGC
ATGGCAGCTGTTACCGCGCACCACGAGGACTCCGACCTCTGGACGCTTCT
ATCGCTGGAGGACGGATGCACCTACACGGTACCCAAGCTTCAGTTCATGT
TCATGGCTGAGGACCCGCACAAGTACATCAAGCGGCTGCAGGCCGCTGTT
CACGAGCGGCACAAAGGGGAGCAGCTTATGTTGATGGAGCTGATCGTGGA
TTGTGTCCTGCACGAGGACATTGAGTCCACCGTGTTTTATAGCTTTAAGC
CCATCGAATCGGTCCTGCAGCGGCTAAGGTGTCTGAGCAGTGCAAAGACG
ACTACGCTCCGAGGTGAACTTGGTGTTCGAGCGCCTAATGGCCTATACGA
GCTGGGAGCAGTTATCTTAGATGCCAAGGAATTTCCCCAGTTCGAACAAT
CACTCAGATTTCTGCCGGTCTTGGCGTGAACGTCTCGGGAAAAGACGTCT
TGACTGCAGTCCGTTGCCATACCATGTCAAGAAGAGCGGATA
UFO09050.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:52:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14651-RB | 3404 | CG14651-RB | 8..1144 | 9..1126 | 5025 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:52:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4480819..4481818 | 9..1005 | 4835 | 99.6 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:52:18 has no hits.
UFO09050.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:17:07 Download gff for
UFO09050.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14651-RB | 1..1064 | 2..1056 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:01:23 Download gff for
UFO09050.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14651-RB | 1..1064 | 2..1056 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:50:13 Download gff for
UFO09050.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14651-RB | 1..1064 | 2..1056 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:50:13 Download gff for
UFO09050.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4480815..4481875 | 4..1056 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:01:23 Download gff for
UFO09050.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 306537..307597 | 4..1056 | 98 | | Plus |
