UFO09051.5prime Sequence
1124 bp (1016 high quality bases) assembled on 2011-08-10
> UFO09051.5prime
CAGTCGACATGCAGTTCCACCTGATCAGAAAGTACGCCAGCAAAGTTAGC
CGGGAGCACTACGCCAGCAGTAGCGTGAAGATCTTTCGGCGGGTCAAGCC
TCCGCAAAAGGTAAACAAACCAAAGAAGCCGGAGAATGTGGAGAATGGCC
CAACGGAATATGCGGAAAATCTGGTCAAGGTGCAGATGATCTCGCGGAAT
TTGCACGCCCAACTGTTCCCACAAGCGCCGCGAAGCATTTCGGAGCAGCA
GGTGGCCTCCGCTAAGGTTTACAAAGACGAGTTGCGCCGGCACGGAGTCG
ATATCGAAAGTTCTGCTCCTGTTTCGGATGTCCAGTTGAAATTGCCCGCG
CTTAGGGGCGCCAATATTGAAGAGCACTTCCACAACATTGCCAAGGAGCA
AGTGCAGCCATACGAGGAGTTACTACTTCCCCTGGTCCAATGCGAGCAGC
TGCCGAAGCGTCCGAAGCGATGGGCTTTCCATACCGGCTGGACAGCTTAT
GATCCAGAGGATGGAACAGCCACGCCGGTGGATCACCCACTGGAGAAGGG
ACTTGTCTTCGATGTGGAGGTGTGCGTCAGCGAGGGGCAGGCTCCAGTTT
TGGCCACCGCCGTCAGCACCAAGAGATGGTATTCGTGGGTGAGCTCAAAG
CTGACGAAACATCGCCTAAGCGTGGAGAAATTAGAGCCATTAGATGTGGA
CACGGACTCAGAGCGACCGCACTACACTACGGACGAACTCATACCACTGG
GCACCACTGGACCTGGCCTGGTGGTGGGTCACAATGTCTCCTACGACAGG
GCGCGACTGAAGGAGCAGTATTTGACCGAGGACACGGGCACTCGGTTCGT
GGACACAATGTCGCTGCACATGTGTGTCAGTGGAGTGACCAGCTACCAGC
GGGCCATGCTCAATCCAAGAAGGACCCGGCTGCCGAGGATCTGGGCTGGC
TGGAGCAGAGCTCTCTTACAGTCTGGTTGAGTGCATCGCTTCTACTGGCG
GTTGGGATACGCTATCCAAGAGCCGAGAACAATTTTCGTCGAGGGAACTT
CTTGGGAGCAGATACGTTCGAGCTTTCAGTCCGTACCACTACTGCGCCCA
GCGAAATGTGGGAGCCTACACATC
UFO09051.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:52:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tam-RA | 3679 | CG8987-RA | 82..1195 | 9..1124 | 5070 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:52:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13826648..13827691 | 1049..9 | 4870 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:52:23 has no hits.
UFO09051.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:17:07 Download gff for
UFO09051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tam-RA | 98..1199 | 5..1104 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:01:26 Download gff for
UFO09051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tam-RA | 77..1178 | 5..1104 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:50:15 Download gff for
UFO09051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tam-RA | 77..1178 | 5..1104 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:50:15 Download gff for
UFO09051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13826595..13827696 | 5..1104 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:01:26 Download gff for
UFO09051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13826595..13827696 | 5..1104 | 97 | | Minus |
