UFO09065.5prime Sequence
1111 bp (1013 high quality bases) assembled on 2011-08-10
> UFO09065.5prime
CAGTCGACATGTGTTTCAGGCCACGCCTCGGTCTAAGAAGAATTACAAAA
CAAGTTCAAAAATGGCTTAATCGACAACAATATCCAATGAGTACGGCCTC
AGTTGTGGTCCAATATCACGAAGAACCAGACAAATCAGATGGTGACAGCA
AACTTTACCGTGCCTTGACCTTATCAAATGGATTACGTGCTATGCTAATA
TCGGATTCTTATATTGACGAGCCGTCAATTCATCGTGCGTCCAGAGAAAG
TTTGAATTCCTCCACCGAGAATTTTAATGGGAAATTGGCGGCATGTGCAG
TACTTGTTGGCGTTGGATCATTTAGTGAACCGCAACAATATCAGGGATTA
GCACACTTTGTGGAACACATGATATTTATGGGGTCTGAGAAATTCCCCGT
AGAGAACGAATTCGATTCGTTTGTGACCAAAAGCGGCGGTTTCAGTAATG
CGCATACTGAAAACGAGGAGACTTGCTTCTACTTTGAGTTGGATCAAACT
CACCTGGATAGGGGTATGGATCTATTCATGAACCTAATGAAGGCTCCACT
AATGCTTCCCGATGCCATGAGTCGCGAACGCTCTGCCGTCCAGTCGGAGT
TCGAACAGACCCATATGAGAGATGAGGTGCGGAGAGATCAGATCCTGGCG
AGCTTAGCCAGTGAGGGATATCCACATGGCACTTTCAGTTGGGGAAATTA
TAAGACCCTTAAAGAGGGCGTCGATGATAGCAGCCTGCACAAAGAGCTTC
ACAAGTTTTACCGAGATCACTACGGCTCCAACCGAATGGTTGTTGCACTC
CAAGCCCAGCTTTCGTTGGATGAGTTGGAGGAATTGCTGGTCCGTCATTG
TGCAGATATTCCTACTAGCCAGCAAATTCCATTGACGTATCCCAGTTAAA
TTACCAAAAAGCCTTTCGAGACCATCTACAGATGTATTCCTAGTCAGCCC
GTGAGATGTGTGCAGCTGGAGCTACTTGGCTGCTACCCAATGAGACTTTA
CCGCAGCAGCCGGAAATGTTTAATTCCACTCATGGTATGGAGGGAGTTGA
GTTAAGGCTACTACGTCATCACCTTTGGGGCATACGATGGGCCAGAGTGC
GAAGGATCGAT
UFO09065.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:53:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10588-RB | 3727 | CG10588-RB | 47..1147 | 8..1083 | 4810 | 97.1 | Plus |
| CG10588-RA | 3237 | CG10588-RA | 47..1147 | 8..1083 | 4810 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:53:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20956980..20957897 | 8..924 | 4540 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:53:15 has no hits.
UFO09065.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:17:15 Download gff for
UFO09065.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10588-RA | 42..1062 | 1..1008 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:01:50 Download gff for
UFO09065.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10588-RA | 42..1062 | 1..1008 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:50:33 Download gff for
UFO09065.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10588-RA | 42..1062 | 1..1008 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:50:33 Download gff for
UFO09065.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20956975..20957995 | 1..1008 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:01:50 Download gff for
UFO09065.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20950075..20951095 | 1..1008 | 98 | == | Plus |
