UFO09069.5prime Sequence
1120 bp (1005 high quality bases) assembled on 2011-08-10
> UFO09069.5prime
CAGTCGACATGAACAAACAAGTTATATTCGGCCTGCTCCTCGCTTGCATT
TTGGTGTGCATTTCAGGACAGGATGAGGAGGATTACCAGGAGTCGCCAAC
GGTACTGATTGCCCTGCTGGTGCGGAACAAAGCCCACATACTGCCCATGT
TCCTCAGCTACCTGGAGCAGCAGGACTATCCAAAGGAAAGAATAGCAATT
TGGTTGCGCTGTGATCACAGCAACGATGACAGCATAGAGCTATTGCGGCA
GTGGCTGGACAACTCGGGGGATCTTTATCACAGCGTAAGCTACGAATTTA
AGCCGGAGGAGCAGAGCTTTGTCAACGGGACTTCACCGTACGAGTGGCCC
GCATCGCGTTTCAAGCACCTAATCGCCCTGAAAGAGGAGGCCTTTCAGTA
TGGTCGCGATATTTGGGCTGACTACGTGTTTTTCCTGGACGCCGATGTCT
TGCTAACTTCAAAAGATTCGCTAAAAGTCCTCACCCGACTCCAATTACCA
ATTGTGGCTCCCATGCTGATCTCGGAGAGCTTATACTCGAATTTCTGGTG
TGGCATGACGGAGGACTACTACTACAGACGCACCGATGAGTACAAGGAAA
TCTATCATGTGAAAAAGCAAGGCAGCTTCCCAGTGCCAATGGTCCACACA
GCCGTTTTGGTGAACATGAACCATCGAGCGGTTAGGAATCTCACCTTCGA
TAGGAACAAGCTGGTGGAATTGCAGAAATCCCGACAGCAAGAGCCACTGT
ACGATGGACCAGCCGATGACATCATTGTGTTCGCCATATCGGCCAACAGT
TCACGCATTCCCTTGCACATTTGCAACGACATAACCTTTGGTTATATACT
GCAGCCATTGGAACCAGGCGATACCTTGGACCACGACGTACAACAGCTGG
TGAACCTCAGAGCATTATGGTCAATGAACTCGGCGCCAGTGCCGCCACTG
CTGGACTACTACAAGCATTGGGAGAAAGAAACCGGAGAAGGAGCAACTCC
TCCTTGGACCGCATAATTTATGATTTATTCTAAAAGACGACCCGAGCGGG
CGGAGAGAAAATGAAAGCTGTTTCGACAGATCGGGATAGAGGCGAGCACT
TCCGGCGGTGATGCAAGACT
UFO09069.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:47:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31915-RA | 2487 | CG31915-RA | 131..1223 | 9..1103 | 5050 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:47:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5528519..5529363 | 202..1049 | 3860 | 98.4 | Plus |
| 2L | 23513712 | 2L | 5528253..5528449 | 9..205 | 985 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:47:08 has no hits.
UFO09069.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:16:22 Download gff for
UFO09069.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31915-RA | 160..1275 | 1..1116 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:43:50 Download gff for
UFO09069.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31915-RA | 124..1239 | 1..1116 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:48:10 Download gff for
UFO09069.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31915-RA | 124..1239 | 1..1116 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:48:10 Download gff for
UFO09069.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5528246..5528446 | 1..202 | 98 | -> | Plus |
| 2L | 5528520..5529434 | 203..1116 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:43:50 Download gff for
UFO09069.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5528246..5528446 | 1..202 | 98 | -> | Plus |
| arm_2L | 5528520..5529434 | 203..1116 | 97 | | Plus |
