UFO09073.5prime Sequence
1081 bp (988 high quality bases) assembled on 2011-08-10
> UFO09073.5prime
CAGTCGACATGGCTGGCATTTGCCCCCGGGAGGCGGTTCGGGTGAAAGTG
AAGAAATGCGAACCCACTGCTCGGCCGGAGTGGCGAAAGTTTTCAGTGGA
CCCGCAGATCACCACGCTGGAGGTGTTGTACTCCCTGCTGGCCAAGGCCT
TCGATGTCAAGTCGGACTTCTCCATTAAGTACAAGGCCTTTGATCCGGCG
GGCAACGAGATCTACCTGGCCGTGCGCTCCGACTGGGATCTGGATGCCGC
CTTTCTGAGGATTCACAACATTTCCATTCAGACGGCCTCAGAACCCTGCC
TCACCCTGCAGATCGATGTGAAGCCATTTACGGTGGTCAGGGAGTGTGAG
ACCGAGGCCTCCCCGGGTAGATCCATAACGGGAGCGCCTGCTCCCGCAAC
TCCTGCACCTTTTGTACCCGCCCGCGAGCTTATGTCACCACTGCAGTCCT
TAGGAGTCTCCCAGAAATATGTCCAGCACATGCAGACCAAACTGGGCAGC
TCCATTCTGAATCAGATGGAGAAAACCTTCTCCATAGTGCAGAAAGCGTT
TAACTTATCCGAGGAGCATATGGCCAATCTACCGCCACGGCCGCCCATGT
GCGACAGCGAGTTCCGGCTCTTTCTGGACGCACTTGGTCAGATTCAACGC
AAGGACGAGTTGCATAGGGTCATCTTCCTAGGAGGCATTGACCCCAGTCT
GCGGCGCGTTGTGTGGAAACATCTGCTTAACGTTTATCCCGGTGGCGCTA
ACGGACTGGCACTTGATGGACACCAGCGTATGGAATTCATGCGACGAAAG
TCTGAGCAGTACTGTCGTCTGAGAGACACATGGAAAGCGGCCGTGAAGCG
AGGCAGTGTGGCTGGAGAACTGGCTTACGTAACGAGCATGGTAAAGAACG
ATGTTCTCCGCACTGGACCGCCTGCATCCATTTTATGCATGCAGCGACGA
CATCAGATACATCGCTGCGCTTTTCAATATCCTCACCACATATGCACCTA
AACCATCAATCGGTCTCATTATTGTCAAGCATTGTCGGACATTGCCTTCC
CGCTACTTGGTTTAACATGGAACGAACGAGC
UFO09073.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:47:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8155-RA | 4211 | CG8155-RA | 150..1197 | 7..1057 | 5015 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:47:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15320888..15321890 | 1057..52 | 4670 | 98.3 | Minus |
| 2R | 25286936 | 2R | 15321976..15322022 | 53..7 | 235 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:47:22 has no hits.
UFO09073.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:16:25 Download gff for
UFO09073.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8155-RA | 142..1205 | 1..1069 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:45:17 Download gff for
UFO09073.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8155-RA | 144..1207 | 1..1069 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:48:15 Download gff for
UFO09073.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8155-RA | 144..1207 | 1..1069 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:48:15 Download gff for
UFO09073.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15320867..15321888 | 54..1081 | 98 | <- | Minus |
| 2R | 15321976..15322028 | 1..53 | 92 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:45:17 Download gff for
UFO09073.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11208372..11209393 | 54..1081 | 98 | <- | Minus |
| arm_2R | 11209481..11209533 | 1..53 | 92 | | Minus |
