UFO09077.5prime Sequence
1128 bp (1015 high quality bases) assembled on 2011-08-10
> UFO09077.5prime
CAGTCGACATGGGCCGTCGTAAGCGTGAAGACTCCTCTGACGAGGAGGGA
GACGACTGTCGCCAGAAGAGGACTGCCGAGACGACGGTGAAGACCGTGGA
GCAGCTGATGAGAGAGCTTAGTTTCCCGGGGCACACTCCGCTCGAATTGA
AGCTGGGGAACCTGGGTTACCTGCTAGGCAAAGGGATGAGTGTTGACCTG
AAGGAGAACCTCATAAATGAGCTAGTAATATGTCTGGGCTATTATCCCGG
ACAGGCCAGTGCCTATGCCACACTTGTGGGCCTAATTAATGTCGCAGACT
TTGAATTCGGCTCCGAGTGCCTGTTGTTCATGGCGCACAAGGTGGGAGAG
TCCGTGCACATTCGCGATTGGAACAGGTGCCGTGGAGTGGTTCACTGCAT
GGTGGATCTGTATCACTGCCAGGTGCTCCCGTCGTCCTATATTCTAAAAT
TGCTCGCAGCCTTCTTGAAGGACTGCGAGGCTCTGAAGGATCCGGACGAT
CTGGTGGGCGTCACACCGCAGATACGACGCGATTTTCTTGCCTACTGTGT
ACTATCCGCCATGCCCCTTATTGGGCGCGATTTGGAGGGGGAGACGGCGT
TTGATAAGCTGATAGTCTCACTCCAGATTTACATTAAGAAGCGGTCCGCT
CTGCACACCAACATGTTGAGTGTGTGGCCGGATTTCAATCAGAGGGACTA
CCTGGAGCTGTTGTGGCAGCAGGTGGACGGTATGAGGCAGAACCATTGGG
CCGAACCGGAGCATCAGTTGATCCCCCGACCTTACAAGTCCTTCTCTGAG
ACCTTGAGCCACGGCCGATCCACCAGCTAAGGGATTATGATTTGGCCGCC
CATGAGGAGCGATGTCGGTATCCGCTGCCGCGTGTATGTTTTCGCATCTT
CTCCTGCGACTCTGTCGGCGAGATCCCTAATATGCCCCCGCCGGTGAGCA
TCGAAAGGCATCTGCTGGAGGCCCATATTCTGGACATACTGATCTTCTTT
TCATAAGGAGAGAAAATCTGTGCCGAAAGCCTCTTGATGTTACCGCCGCC
CTCCAAGCCCCAGTGCCGTCTATACTGGCACTGTGGGAGGGTGATCTTGG
GCGAAATGCGTGCGGCTGCCACCGCCAA
UFO09077.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:47:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7907-RC | 2616 | CG7907-RC | 182..1299 | 9..1128 | 5235 | 98.5 | Plus |
| CG7907-RB | 2733 | CG7907-RB | 299..1416 | 9..1128 | 5235 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:47:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21404098..21405130 | 9..1040 | 5005 | 99.6 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:47:40 has no hits.
UFO09077.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:16:27 Download gff for
UFO09077.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7907-RC | 165..1287 | 1..1126 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:47:17 Download gff for
UFO09077.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7907-RB | 292..1414 | 1..1126 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:48:22 Download gff for
UFO09077.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7907-RB | 292..1414 | 1..1126 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:48:22 Download gff for
UFO09077.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21404091..21405213 | 1..1126 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:47:17 Download gff for
UFO09077.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 17229813..17230935 | 1..1126 | 98 | | Plus |
