UFO09078.5prime Sequence
1095 bp (1015 high quality bases) assembled on 2011-08-10
> UFO09078.5prime
CAGTCGACATGGGCGAAAGGAGCTTTCGAAAACTGGTATTGGGAGTGATC
CTGACGACCATCATTCTCTATGCTCTGCTTTTTTTGGACACGCAGTGCTA
CGAGACTGGCGGAAAAATACATAATGCATTCTTTGTGAACACCGACGGAT
GTCGCATTATAGCCATGGATGTGATGAACCCGACCATTGCCAAGTACACC
GACTGGGAGTGGAAGGACAAGAGGTTCTACCTGAAGTGCCCCCATCAGAC
CTGGTTCCGAACGGAGGTGGCGAACGGGGATTGGTACCTTAAGCTGACCC
GCGACATCGACAGAATCTTGCAGGAAAGCGATCTGACCCACGACTGGCAG
ATAAAGTGCTATTGGTTCCGGATTAAAATAAAGGGGCGTTGGCGGGCCAA
GATCTACGGTCCAACCATGTTCCCTCTGGAGTACCCGTATGCCCTGAAAG
TCCCCAAAGGACTGAGGCACATGCGAGTCAAGTGCCTGAATACTTTCACA
AACAAAACCTTGCACGATGATGCCCATTTCTTCATTCAACCACCACCTGA
GAAGTTGTTGAAGAAACCTCCGGCGACCTTGAAGTACTGGGATGGGGAGA
AACACTCGAGTGGTGCGACTTCACCCATTTCTGTGATGATTTTGGGTCTG
GACTCCGTTTCGCATCTCAATTTGCTGCGCCAGATGCCGCGGACCGTGCG
CTATATGCGCCAGACATGTCGCAGGTGGAGTTCTGGGGCTTCAACAAGAT
CGGCACCAATACCTATCCAAACTTGATAGCTTTGCTGACGGGCCTCAGTG
CGGCAGAGTCGGAGGCTTATTGGGTGCGGCAGAAATGTATGGATAACCTG
CCTCTGATTTGGAAAGGAGTTCAAGAGGGCCGGTTATAATACCAGTTTCG
CCGAGGACATGGCCATATATTCCATGTTCTATTTCGGCAAGCCCGGCTTC
AAGCGTCCGACCACGGATAACATTTGCACGACTTCATGGTGGATCTCTAT
ATCAATAGGCAGGCCAGTCGTATCAGAAACACATGCATGGGCGAAAGGTC
TCATGATTTCCTCTTGGAAATGACGAATAGCGTGCTGCCCAACGC
UFO09078.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:47:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31933-RA | 2076 | CG31933-RA | 41..1129 | 9..1090 | 5065 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:47:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1822248..1823291 | 1048..9 | 4900 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:47:45 has no hits.
UFO09078.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:16:28 Download gff for
UFO09078.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31933-RA | 41..1107 | 9..1068 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:47:46 Download gff for
UFO09078.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31933-RA | 41..1107 | 9..1068 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:48:24 Download gff for
UFO09078.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31933-RA | 41..1107 | 9..1068 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:48:24 Download gff for
UFO09078.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1822225..1823291 | 9..1068 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:47:46 Download gff for
UFO09078.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1822225..1823291 | 9..1068 | 98 | | Minus |
