UFO09083.5prime Sequence
1137 bp (1009 high quality bases) assembled on 2011-08-10
> UFO09083.5prime
CAGTCGACATGGACAATCCCAGTTCACCACCGCCAAATACGCCCAGCGAT
GCCGCCGAACGCCGCGATCTGCGGGCAGCAATGACGTCGCCGGTTGGCGA
CTTTGAGCCGTTCGAGAACGAGGACGAGATCCTGGGAGATCAGACCGTTC
GCGATGAGGCCGAGGAGGAGGATGGCGAGGAGCTGTTCGGGGACAACATG
GAGAACGATTACCGGCCCATGCCTGAGCTGGATCACTACGATCCGGCGCT
GCTGGACGACGAGGATGACTTCTCGGAGATGTCCCAGGGCGATCGCTTTG
CCGCCGAGTCGGAGATGCGTCGACGCGACCGGGCCGCCGGAATCCACCGC
GACGATCGTGATCTGGGTTTCGGTCAGTCCGATGATGAGGACGACGTTGG
ACCCCGGGCCAAGAGACGAGCTGGCGAGAAGGCAGCTGTTGGCGAGGTAG
AGGACACCGAGATGGTGGAGTCTATTGAAAACCTGGAGGATACCAAGGGA
CACTCAACTAAAGAGTGGGTCAGTATGCTAGGACCACGCACGGAAATCGC
CAATCGCTTTCAATCCTTTTTGAGAACTTTTGTGGATGAAAGGGGCGCAT
ACACCTATCGTGATCGCATACGTCGGATGTGCGAGCAGAACATGTCTTCG
TTCGTCGTCTCCTACACTGATCTGGCCAACAAGGAACACGTATTGGCCTA
TTTCCTGCCCGAGGCTCCCTTTCAAATGCTCGAGATTTTCGATAAAGTGG
CTAAGGACATGGTGCTCTCCATTTTCCCCACTTACGAACGTGTCACCACA
GAGATTCACGTGCGCATCTCGGAGCTGCCGCTGATCGAGGAGCTGCGCAC
ATTCAGAAAACTGCATCTGAACCAGTTGGTTCGCACTTTGGGCGTGGTAA
CTGCCACCACCGGAGTTCTTCCCCAGCTATCCGTGATCAAGTACGACTGC
GTTAAGTGGGGCTATGTGCTGGGTCCCTTTCGTTCAGTCCCAAAATACGG
AGAATAAAGCCGATTCCTGCCCAGAGTGCGAGCACTGGACCCTTCTCAAT
CAAACATGGAGCGACGTTGTATCGAATTATCAAAGGAATACGTGCAGGAT
CGCCAGCAGGATTCGCGAGCCATCCTCGCACAGAGAA
UFO09083.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:48:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mcm2-RA | 2898 | CG7538-RA | 132..1242 | 9..1114 | 5215 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:48:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8265101..8266169 | 9..1076 | 5035 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:48:03 has no hits.
UFO09083.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:16:30 Download gff for
UFO09083.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mcm2-RA | 253..1352 | 1..1099 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:49:47 Download gff for
UFO09083.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mcm2-RA | 126..1225 | 1..1099 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:48:32 Download gff for
UFO09083.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mcm2-RA | 126..1225 | 1..1099 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:48:32 Download gff for
UFO09083.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8265095..8266194 | 1..1099 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:49:47 Download gff for
UFO09083.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4090817..4091916 | 1..1099 | 98 | | Plus |
