UFO09094.5prime Sequence
1098 bp (1002 high quality bases) assembled on 2011-08-10
> UFO09094.5prime
CAGTCGACATGAGCTGCTTTAGTGCGATGAGTGCCCCGCTGCTGGGCGAG
ATGGAGCAGACCATTGGTATGCTGGAGCGCGGCACCATCGTGACCAAGTT
GTATGGGAAACAGCGTCGTCCGGATCGCCGCCACCTGATGCTCATACGAG
AGACACGACAGCTGCTCTGGGCAACGGTGGCCACACAAACGCCACGCACC
GACTACGAGGGCGCCATACAGCTGCGGGAGATTCGCGAGATACGGGTGGG
CAAGCACTCGAAGGAGTTTCGCCTGTTTGCCGACGACTGTCAGCGCTTCG
AGTCCAGCAAGTGCTTTGTCATACTGCACGGCAATCACTTCAAGCTGAAG
AGCTTCTCGGTGGTGGCTCTGTCGGAGATCGAGGCCGACAATTGGGTGCG
GGGATTGCGTTACATGGTTAAGGACACACTGGGAGCACCCTATCCCTTGC
AAATTGATCGCTGGCTGCGTCGCGAGTACTATCAAATCGAGAATGTTAAC
ACGCATTCCGCCAAGGCCACGGAACAGTCGCCAGCCCAGGTGACCATTAA
GGACTTTAAGCTCTTTTTGGCCGGAGTTAGCTGTAAGATGACCACCGGCA
AGTTCATGGAGCACTTTACCGAGGATGTGCGGCGCAAGCACGATCTCAAG
TTTGATGATTTCTCGCGGCTATATCAGAAGTTGCTGCTGCCCAACGGATT
TGCCAGCGTCTTGTCCGGATCGGGAGTGGCCAACTTTCCCTATTCGGAGG
ACCAACAGGTGGTGCGACCGGCGGAGCTGAAGCAGTTCCTCGAGACGGAA
CAGCGCGATGTGAGCGCCAGTGAGATCAGTAGCGCAGCCATTGCCTCCTT
CATTCGGGACTTTGTTCAGGACGTGGAACGTGATGTTCAGGAGCCGTATC
TCACCTTCCCGGAGTCGTCGACTTTCTTGTTCTCCAAGCAAAACGACCTG
TGGAACAGCAAGTACGACCAAGTGTTCATGGACATGAACCTGCCGTGTCC
TCCTACTGGATCGCATCGTCGCACAAATACCTACTGGAGGGGGCGATCAG
TTCTCCAGTGATCCTCCTGGCGAGGCTAAGCCGCGCCTCTCGCAATGG
UFO09094.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:48:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| sl-RA | 5678 | CG4200-RA | 272..1338 | 9..1076 | 5135 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:48:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16350586..16351637 | 9..1061 | 4980 | 99.2 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:48:46 has no hits.
UFO09094.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:16:36 Download gff for
UFO09094.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sl-RA | 274..1354 | 1..1086 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:54:25 Download gff for
UFO09094.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sl-RA | 268..1348 | 1..1086 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:48:49 Download gff for
UFO09094.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sl-RA | 268..1348 | 1..1086 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:48:49 Download gff for
UFO09094.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16350582..16351662 | 1..1086 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:54:25 Download gff for
UFO09094.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16244615..16245695 | 1..1086 | 98 | | Plus |
