UFO09095.5prime Sequence
1078 bp (1001 high quality bases) assembled on 2011-08-10
> UFO09095.5prime
CAGTCGACATGTCGAAACGGAGCGCCGACGACGCCACCGGCAGCAGCTGC
TTGGTGGCCGCCGCAGCCGCCGGCCAGCCGCCCATCAAGAAGGTGCACTT
CGAGCCCCATCTGATTGGGCCGGTGTCCACGCTGGAGGAGATGGACATCA
AGGTGCTGGAATTCCAGAACAAGAAGCTAGCACAGCGCATCGAACAGCGG
ATGCGAACGGAGGCGGAGCTGCGACATCGAATCGAGCAGCTGGAAAAGCG
GCAAACGCAGGACGACGCCGTTCTAAACGTGGTCAATCGGTATTGGAATC
AGCTGAACGAGGACATACGAGTCCTGCTGCAGCGCTTCGATGCCGAGACG
GCCGACGAACTGGAGAACCGGAATGAGAACGAGGTGACCACCTCGTTTCT
CGCCCAACTGTCCACCTGGGACAAGGAGGAGCTGGACGAGAAGCTGGCCA
ACCGCGTCCAAGTGTCCAAAAGGGCGGTCGCCAAGATCGTACAGGTTATT
GATAGGTTAATGCAACGCAATGAAAAGATAACTCATGTCTTGAAAGGTGA
TAGTCTGGCTTCAGCTGGCTCCGGTTCAGGAGCGGGAGCTGGCGGCGAGG
AGGAGCAGCAGCAGGCCAGCGGCGATGCGGAGACCACAACGTCATCGGCC
GGTGTCCATGCGCTAGAGGAAACCCTGAAGCAAACGCACATCGAGATCAT
GAGCGAAAATCACAAGCTGCAGAATCTGAATACCTCGCTGCACGAGAAGT
TCCACACCATGTCGCTGAAGATGAAGGAGTACCAGGACGCTCATACCGCC
AAGGAGACGGAGAACGCCGAACTGAAGAACCAGATAGACGAACTGCAATA
TGACCTAGAGAAGATCCATTGCCGGAATGATAAGCTGGAGAACCACTTGG
CCGAGGCTATTGAAAAGCTGAAGCCTACCACCAGATTACGGTGATCCCAA
TAGAGCACTATAGTGCCAAGACACACTACCACAGGCAGCGGCGGGCGCCA
CCACAGCGTATAGCAGCTATGGAGGAGCTGCAAGGACCTGGAGGAGTACG
CGACCTGGACAACACGAACTGCAGACTG
UFO09095.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:48:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bre1-RB | 3993 | CG10542-RB | 145..1213 | 9..1064 | 4960 | 98.3 | Plus |
| Bre1-RA | 3632 | CG10542-RA | 145..1213 | 9..1064 | 4960 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:48:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 5792854..5793845 | 994..9 | 4695 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:48:50 has no hits.
UFO09095.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:16:37 Download gff for
UFO09095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bre1-RA | 135..1212 | 2..1064 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:54:55 Download gff for
UFO09095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bre1-RA | 136..1213 | 2..1064 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:48:51 Download gff for
UFO09095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bre1-RA | 136..1213 | 2..1064 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:48:51 Download gff for
UFO09095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 5792777..5793855 | 1..1064 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:54:55 Download gff for
UFO09095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 5785877..5786955 | 1..1064 | 97 | | Minus |
