UFO09202.5prime Sequence
1058 bp (917 high quality bases) assembled on 2011-08-17
> UFO09202.5prime
CAGTCGACATGGGCTCCCGTTCACGTACACCCAGTCCGTCGGGCAAGCGA
CGCCACCATAAGAGCAAGCACAAAAAACGCAGTAAGTCCCACCACGACCA
CGAGCGGCCCAGCACAAGAACGGATAGAGACAAGTCCTCGGAGGTGAACA
ACCATGGACGACATCGCGAACGGGACAGGGACCGCGAGCGGGATAGACAC
CGCAGCGACCGACACACTGAGCGCGACTACCGTCACTCCCCCTCGATCCT
GAAATCCCGAAAACGCTCCAGCTCGTCGAGCAGCGACAGTCAGTACTCCG
AGCAGGAGTCGCAACGTAGCAAACAGAAGCGCAGCCGCTTTAAGAAGCTG
GATGAGCAAAACCAGATGCAGGTCGAACGCCTGGCCGAGATGGAGCGGCA
GCGTCGGGCGAAGGAGCTCGAGCAAAAGACAATCGAAGAGGAAGCCGCCA
AGCGCATAGAGATGCTGGTAAAAAAGCGCGTCGAGGAGGAGCTAGAAAAG
CGTCGCGACGAAATCGAACAGGAGGTCAATCGACGCGTTGAGACCGCCAA
GGCTGAGATGGAGCGCGAAATGATGCTGGAGCTGGAGCGGCGGCGAGAGC
AGATACGCGAAGAAGAACGCCGGCGCGAGGAGGATGAAAAACAAAAACGC
GAAGAGCTCGAAGAAATTTTGGCCGAAAACAATCGCAAAATCGAAGAGGC
GCAAAGAAAACTGGCCGAAGAACGGTTAGCAATAATCGAGGAGCAGCGCC
CTTATGGACGAGGAGCGGCAACGCATGCGCAAGGAGCAGAGAAGCGCGTC
AAGGAAGAGCAAATGTCATATTAGGCAAAAACATTCCAGGCCCAAGCTAT
CGTTCTCCCTGAACCGGGCGCATTAGCAAGCTTTCTAGACCATTCGTTTG
GCGGCGCCGGGCCAGGTAGTGGTTCATAATCATTATCATATCATATTCAT
ATCACACTAGCTAGAGATCCTGTTCATGACTAGTGCTGGATCTCACATAA
AAACGCCGGCGCACGAACGTCTGACATCCGATGGAGTCTGAGTCATACTG
AATCTATC
UFO09202.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:58:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31712-RA | 1491 | CG31712-RA | 129..999 | 8..875 | 4220 | 99.3 | Plus |
| CG31712-RB | 3159 | CG31712-RB | 129..751 | 8..630 | 3115 | 100 | Plus |
| CG31712-RB | 3159 | CG31712-RB | 2417..2667 | 628..875 | 1120 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:58:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9937658..9938006 | 356..8 | 1745 | 100 | Minus |
| 2L | 23513712 | 2L | 9937237..9937512 | 630..355 | 1380 | 100 | Minus |
| 2L | 23513712 | 2L | 9935259..9935424 | 875..713 | 570 | 96.4 | Minus |
| 2L | 23513712 | 2L | 9935485..9935571 | 714..628 | 435 | 100 | Minus |
Blast to na_te.dros performed 2014-11-26 23:58:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GATE | 8507 | GATE DME010298 8507bp Derived from AJ010298 (e1315889) (Rel. 56, Last updated, Version 1). | 3512..3540 | 671..643 | 109 | 86.2 | Minus |
UFO09202.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:44:35 Download gff for
UFO09202.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31712-RA | 131..1007 | 1..875 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:07:45 Download gff for
UFO09202.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31712-RA | 123..999 | 1..875 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:55:50 Download gff for
UFO09202.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31712-RA | 123..999 | 1..875 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:55:50 Download gff for
UFO09202.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9935486..9935569 | 630..713 | 100 | <- | Minus |
| 2L | 9937238..9937510 | 357..629 | 100 | <- | Minus |
| 2L | 9935272..9935423 | 714..863 | 96 | <- | Minus |
| 2L | 9937658..9938012 | 1..356 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:07:45 Download gff for
UFO09202.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9935272..9935423 | 714..863 | 96 | <- | Minus |
| arm_2L | 9935486..9935569 | 630..713 | 100 | <- | Minus |
| arm_2L | 9937238..9937510 | 357..629 | 100 | <- | Minus |
| arm_2L | 9937658..9938012 | 1..356 | 99 | | Minus |
