UFO09203.5prime Sequence
1109 bp (980 high quality bases) assembled on 2011-08-17
> UFO09203.5prime
CAGTCGACATGTTGACTGGTTCAGGGCATTGCCAAGTGGGATACGTGCGG
CACCTGTCGGAGCTGCGGATAAGGGAACTTGAAAAATTGTCGGTTCGTAT
ACAGGGCTCCATCAACACCGAAAAGTATGCCTGCGAGAGCTATTTCGACT
ACGTCTGTAGCCGCAATCGACCCCTCTTTTCGATCATGGGACACATGCCG
CAAATGGGCGATCTTATGCAGTTGCTGACCGAGCTGCAGAACGATCCAGA
GCCATTCGAGGCTAAGCAGAAGACGCTGGACTTCTTCATCTCCTGCAACG
TGCACCACGCGCTGGAAGACTGCTATCGTGAGACCTATGAGTATTTCAAG
CCACTTTTCGGGTATATAGTTACAAAAAACATGCTCAATGGAGAATCCCA
CGAGCTGGATGACTTTCTGGGCATTTTGGACCGCTTCGTCGTCAGGTTTC
AGAAGGACAGAGAGTCGAATCCCATTCTCAGCAAGCTGGCCACGTATAAG
CAGAAATTTAAAACGCCGCGAGTCTACTTCCATGCTAGAGACCTGAGCCG
GGAGTACAAGGACCTGCGGATCTACCGGGAGAGCTACGAACACAACGTTC
GCAATCTGGAGCAGCACAGAAAACTGAATTCAACATACGAATTGGGGGTT
CAGCGCACCATGCTGGATTGGAGCATGTACCTCTTTCAGAGCCGCAACAA
GCCCATGTCCTACTTCTACTCCACGTTTACGGTCCATTTGTACATGATGC
TTTTTAATAGTCTGGAGCGTCAGCGTGATTTCACGCGGTTTCGCGAAGAT
GTGGAGTGTTTAGGCTGCCGCAGTTCGTTAATGTTCTGGATGAGCCAGAA
TGCTGGCTGTGATCTACTTAAGGAGCTTCCGAGCGGCCTGATAGACTACA
GCGCCTGATCACTCGCCTCCACAGGACAGTGGGATATACGATCAGGAAAT
GCGTCCTTCAAGTACCATCTGGACAACAGCGTATATTTTTTACTCTTACG
CTCAGACCTTCTGGTGAGTTGGGAAGATCTGGCGAGCCAGTCTTTCTATC
TTGGCCTAACAGAACAGACTTTACGCACTATACTCTTGGGATCACGGAAC
CTATGCACT
UFO09203.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:58:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1092-RD | 1310 | CG1092-RD | 74..1170 | 9..1088 | 4850 | 97.3 | Plus |
| CG1092-RC | 1492 | CG1092-RC | 256..1352 | 9..1088 | 4850 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:58:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4267260..4268095 | 189..1013 | 3625 | 98.1 | Plus |
| 3R | 32079331 | 3R | 4267025..4267206 | 9..190 | 910 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:58:18 has no hits.
UFO09203.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:44:35 Download gff for
UFO09203.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1092-RA | 66..1143 | 1..1066 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:07:50 Download gff for
UFO09203.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1092-RC | 250..1327 | 1..1066 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:55:54 Download gff for
UFO09203.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1092-RC | 250..1327 | 1..1066 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:55:54 Download gff for
UFO09203.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4267019..4267205 | 1..189 | 97 | -> | Plus |
| 3R | 4267261..4268151 | 190..1066 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:07:50 Download gff for
UFO09203.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 92741..92927 | 1..189 | 97 | -> | Plus |
| arm_3R | 92983..93873 | 190..1066 | 97 | | Plus |
