UFO09221.5prime Sequence
1138 bp (1032 high quality bases) assembled on 2011-08-17
> UFO09221.5prime
CAGTCGACATGGATGGTGCCATTGCAATGAATCATGTGGTGGAATCCGAC
AAGGAGAAGAGGCAATTTAAACTGAAAATTATGGAGCTCGAGCACGAAAT
GAGGATGGAAAAGGATCCAGCTCGCGCCAAGATGATCGAGGAGCACATTG
AGAAATTGAAGAAACTGGATGAGGAGAACCAAAAGCGGAACTTGGAAATT
GCCAAGGCAAACGTGATGTTAATGACAGCGAATACAAAGTTTAGAGTGGG
TTATCATATTATTAACAACCTTGCAAGCTTTCTAGACCATTCGTTTGGCG
CGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAAT
CACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACC
AATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGA
GTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGAT
ATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCAT
TAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGA
ATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCAT
GGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAA
AACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCA
ATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATC
TTGCGAATATATGTGTAGAAACTGCCGGAAATCGTCGTGTATTCACTCCA
GAGCGATGAAAACGTTTCAGTTTGCTCATGGAAACGGTGTAACAAGGTGA
ACACTATCCCATATCACCAGCTCACCGTCTTTCATTGCCATACGAAATTC
CGGATGAGCATTCATCAGCGGCAGATGTGAATAAAGGCCGGATAAACTTG
TGCCTATTTTTCTTTACGTCTTTAAAAGCCGTAATATCCAGCTGACCGTC
TGTATAGTACATTGGAGCACTGACTGAATGCTCAATGTTCTTTACGATGC
ATGGGATTATCACGGTGAATCAGTATTTTCCATAGCTC
UFO09221.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:00:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32368-RA | 410 | CG32368-RA | 57..320 | 9..272 | 1320 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:59:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7915493..7915756 | 9..272 | 1320 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:59:58 has no hits.
UFO09221.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:44:42 Download gff for
UFO09221.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32368-RA | 57..323 | 9..276 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:08:37 Download gff for
UFO09221.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32368-RA | 57..323 | 9..276 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:56:35 Download gff for
UFO09221.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32368-RA | 57..323 | 9..276 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:56:35 Download gff for
UFO09221.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7915493..7915756 | 9..272 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:08:37 Download gff for
UFO09221.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7908593..7908856 | 9..272 | 100 | == | Plus |
