UFO09224.5prime Sequence
1132 bp (985 high quality bases) assembled on 2011-08-17
> UFO09224.5prime
CAGTCGACATGAAACAGTACCTGGTGCTTGCCCTCGTCTTTGCGGCCATT
CTGGCCATGATCAGCGGCCATCCTCTGGAGGAACAAAAGATCACGCTGGA
AGATGCTGAAGCACAGCCGGGAATCGATGATGGCACTGGAGTTAGGGCCG
CTCGTCACTTTGGCGGCGGCTTTGGCCGCGGAGGATATTGCTGTGGAGGA
GGCGGTGGCTTCCGGCGCGGTGGTTTCGGTGGCGGTGGTTACGGTGGCGG
TGGTTACGGTGGCGGTGGCTATCCAGGTGGCGGCTTTGGCGGATATCCCA
GAGGTGGATTTGGCGGCGGCAGTGCATCAGCATCGGCGTCAGCTTCAGCC
AGTTCCAGTTGGGGACGTAAAGCAAGCTTTCTAGACCATTCGTTTGGCGC
GCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATC
ACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCA
ATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAG
TTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATA
TCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATT
AAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAA
TCGCCAGCGGCATCAGCACCTTTGTCGCCTTGCGTATAATATTTGCCCAT
GGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAA
AACTGGTGAAACTCACCCAGGATTGGCTGAGACGAAAACATATTCTCATA
ACCCTTTAAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTG
CGATATATGTGTAGAAACTGCCGAAATCGTCGTGGTATCACTCCAGAGCG
ATGAAACGTTTCAGTTTGCTCATGGAAACGGTGGTACCAAGGTGAACACC
TATCCCATTATCACAGCCCCACCGTCTTTTCATTGGCTACCGAATCCGAT
GGAGCAGTCACACGTCTCAAGGCGTGCAGGATTGATAAGCCCGATAACTT
GTGCTATTTTCTTTACGGTCTTTAAACGAGCC
UFO09224.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:59:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Listericin-RA | 450 | CG9080-RA | 29..391 | 9..371 | 1815 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:59:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11241804..11242166 | 371..9 | 1815 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:59:04 has no hits.
UFO09224.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:44:39 Download gff for
UFO09224.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Listericin-RA | 22..395 | 1..375 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:08:12 Download gff for
UFO09224.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Listericin-RA | 21..394 | 1..375 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:56:12 Download gff for
UFO09224.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Listericin-RA | 21..394 | 1..375 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-27 00:56:12 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 16:08:12 has no hits.
