UFO09244.5prime Sequence
1130 bp (1030 high quality bases) assembled on 2011-08-17
> UFO09244.5prime
CAGTCGACATGTCTGGTAAATACGATCTGCTCAGTGAGCAGGGCCTCCGT
CTGGACGGACGACGTCCTCATGAATTGCGCCGCATCAAGTGCAAACTGGG
AGTCTTCGAGCAGCCCGATGGAAGTGCCTACATGGAGCAGGGAAACACCA
AGGTTCTGGCTGCCGTCTATGGACCCCACCAGGCCAAGGGCAATCAGACA
GAGTCCGTCATCAACTGTCAGTACAGTCAGGCAACCTTCTCCACGGCGGA
GCGCAAAAATAGGCCGCGCGGCGATCGCAAATCTCTGGAGTTCAAGTTGT
ACCTGCAGCAGGCGCTAAGTGCTGCCATTAAATCAGAACTATATCCCCGC
TCCCAGATAGACATATACGTGGAGGTGCTCCAAGACGACGGCGCCAACTA
TGCGGTGGCTCTTAATGCCGCCACACTGGCGCTAATTGATGCGGGAATCT
GCCTCAATGAGTTCATTGTCGCCTGCACCGCCTCACTGAGCAAATCGAAC
ATCCCGCTCACAGACATCTCTCAGTTCGAGGAGGTATCCGGCGGACCGAA
GCTAACCGTGGCTGCCTTGCCTACCGCCGAGAAAATCGCCTTTCTTGAGA
TGAGTGAGCGGTTCCACATCGATCACTTGGAAACCGTCATCGAGACTGCT
ATGGCGGGTTGCCGCGAAATAAGGGACATTCTGGAGGCAGCAGTCAAGGA
GCACCTTCTGCACATGGGCAGTGCCTCTGACTTTGCGAAAGTTGGTGCAA
GCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAAT
CATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTC
ATGACTAGTGCTTGGATTCTCACCAATAAAAACGCCCGGCGGCAACCGAG
CGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCA
ACAGGAGTCCAGCGGGCTCGATATCAAATTACGCCCCGGCCCTGCACTCA
TCGCAGTACTGTTGTATTCATTAAGCATTCTGCGAAATGAGCCATCCAAA
CCGGCCATGATGACCTGATCGCCAGCGGCATCAGCACCTTGTCCGCCTTT
GGCTTATAATTGCCATGTTGATACGGGGCC
UFO09244.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:01:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ski6-RB | 903 | CG15481-RB | 79..816 | 9..746 | 3675 | 99.9 | Plus |
| Ski6-RA | 911 | CG15481-RA | 87..824 | 9..746 | 3675 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:01:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13221484..13222221 | 746..9 | 3675 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:01:57 has no hits.
UFO09244.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:44:50 Download gff for
UFO09244.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ski6-RA | 95..836 | 9..750 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:09:31 Download gff for
UFO09244.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ski6-RA | 87..828 | 9..750 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:57:18 Download gff for
UFO09244.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ski6-RA | 87..828 | 9..750 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:57:18 Download gff for
UFO09244.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13221479..13222221 | 9..750 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:09:31 Download gff for
UFO09244.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13221479..13222221 | 9..750 | 99 | | Minus |
