UFO09249.5prime Sequence
1122 bp (1006 high quality bases) assembled on 2011-08-17
> UFO09249.5prime
CAGTCGACATGTCCACCGGCCGCCGTTTGGCCAAGCGCTCCATCATCGGC
ACCAAGGTGTGCGCCAAGGGTCCGGATGGCCTCTGGTACTCCGGCACCAT
ATCCGACGTGAAAACGCCGCCCTCGTACAGCGGACCGCTCTCGCCGCCGC
CGCCGCCCACTTTTGTGGTGCCCGGCGAGGCACCGATTAATGCCGATACG
CGCTACCTGGTCCGTTTCGATTTCAAGACCGCCGTCGAGTCCCCAACCGC
TACCACGTCGTCCGCGGCCTCGACCTCGTCCACATCCTCCACAGATCCGT
CGGTCATCGTGGAAACGCGTCGCGCTGCCAACGTACACATCAGTCCCGCT
CAGGCACTGCGTCGCAGCGCCATGATCAAGGAGTTCCGCGAGTCGGATCT
TATTGGACCCGGATTCCGGTCCATCATGGACACCGAACTGCAGCCTGGCC
AGCGGGTCTACTTCACCTACAATGGACGCGAGCAGAGCGGCGATGTCGTC
AAACACGACGCTACCAAGGATGAGGTGATTGTCAAGATCACAACAGTTGG
AAATGAGGAACCCATTGAGCTGAAGAAGCGACTGGAGGAAGTGCGTCTGC
TGGAATCGCGACGCTCCGCCCGTCTGGCAGACCAGGATCGCGACACGGAC
TTTGCCAGACTCGCCGACATGAGTGGCGAACGCCGCAGAACCACCACACA
CAGTATTGAGGTGCCATCGCAGCTGACGGCGCAGCACAATTCCCGGAAAC
GTCCGCCCAGCGATCACCAGGACTACGGCAACTATCTGGAAACATGCCGT
GCAGCCGAGATTCTGTCATCGATGAAGTTGCAGAGTCCGCATGGCTCAAT
GGCCGACAAGTGCTCGAGTCCCGGCAGCAGCTCTTCGGCTTCCTGGAGCT
CCGGTTCCCCGTCGCGCCATTGAGTGACGACGGCCACGCCCCACCACAGC
CCACACATATTCATGTCGCCCCACGATGCGACAACGCCACGCACACGCAC
AGCATCCGTGTCACGTCGGACGAGGCATTGTCATCGACTACAGGAGGGAG
CCCAAGAAAGTTGAGTATTTTCTCGCTTGAAGGCCAGGCTTTCTAGAACA
TTCCGCTGGCCGGCAGTAATTG
UFO09249.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:02:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Glut4EF-RD | 4787 | CG34360-RD | 995..2068 | 9..1078 | 5040 | 98.5 | Plus |
| Glut4EF-RH | 10796 | CG34360-RH | 995..2047 | 9..1059 | 5005 | 98.9 | Plus |
| Glut4EF-RG | 4308 | CG34360-RG | 995..2047 | 9..1059 | 5005 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:02:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9875675..9876224 | 9..558 | 2750 | 100 | Plus |
| 3R | 32079331 | 3R | 9930362..9930545 | 556..739 | 920 | 100 | Plus |
| 3R | 32079331 | 3R | 9943677..9943891 | 847..1059 | 685 | 92.1 | Plus |
| 3R | 32079331 | 3R | 9943481..9943587 | 740..846 | 520 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:02:33 has no hits.
UFO09249.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:44:53 Download gff for
UFO09249.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34360-RD | 995..2047 | 9..1059 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:09:51 Download gff for
UFO09249.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Glut4EF-RD | 995..2047 | 9..1059 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:57:31 Download gff for
UFO09249.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Glut4EF-RD | 995..2047 | 9..1059 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:57:31 Download gff for
UFO09249.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9875675..9876223 | 9..557 | 100 | -> | Plus |
| 3R | 9930364..9930545 | 558..739 | 100 | -> | Plus |
| 3R | 9943481..9943587 | 740..846 | 99 | -> | Plus |
| 3R | 9943677..9943891 | 847..1059 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:09:51 Download gff for
UFO09249.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5701397..5701945 | 9..557 | 100 | -> | Plus |
| arm_3R | 5756086..5756267 | 558..739 | 100 | -> | Plus |
| arm_3R | 5769203..5769309 | 740..846 | 99 | -> | Plus |
| arm_3R | 5769399..5769613 | 847..1059 | 94 | | Plus |
