UFO09251.5prime Sequence
1122 bp (984 high quality bases) assembled on 2011-08-17
> UFO09251.5prime
CAGTCGACATGGTAGCTGGTGGTGCCTCGGAAACGGGCGGCGTGAAGCCG
ATGGTAATTGCGGGCCGCATGGTGCGGGAGCGTGAGCGCCTGATCGGCAT
GTCGCCGGAGGAGCGCGCCTGGCGCAAACAGTGGCTGAAGGACCAGGAGC
TGCACCATGGACCCCGCAAGGTGCCCGCCCTGGAGCTGGAGCTGAACAAC
CCCATCAAGCGCTTCTACCGCGCTCCCCTCGACAAGGTCTGCAATGTTTT
GGAACCCGTCCTGGGCTTTCAGCGCGCGTACACCGTGCGCTTCTGGACCG
GAAAGGCTCTGCTCGCCCTAACCGGAATCTACGCCGGCGCCTACTACTTC
AAGTACAACCAGAATGTAAGTAATTGGTCGAGGATTCAAGTTGGCTATTA
CTATAAGTCATTCCAAATGTACGCAAGCTTTCTAGACCATTCGTTTGGCG
CGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAAT
CACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACC
AATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGA
GTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGAT
ATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCAT
TAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGA
ATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCAT
GGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAA
AACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATTTTTTTC
AATAAACCCTTTAGGAAATAGGCCAGGTTTTCACCGTACACGCCACATCT
TGCGATTATTTGTTGTAGAACTGCCGGAAATCGTCGTGTTATTCCACTCC
AGAGCGATGAAACGTTTCAGTTTGCCTCATGAAACGGGTGTTACAGGTGA
AACTATTCATATTCACCAGCTCCACGTCTTTTTCATTTGCATTACGAAAT
TTCGATGAACATTCCATTCGAA
UFO09251.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:02:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(2)35Di-RC | 992 | CG13240-RC | 103..460 | 9..366 | 1790 | 100 | Plus |
| l(2)35Di-RA | 710 | CG13240-RA | 103..460 | 9..366 | 1790 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:02:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15750721..15750976 | 264..9 | 1280 | 100 | Minus |
| 2L | 23513712 | 2L | 15750493..15750652 | 422..263 | 800 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:02:52 has no hits.
UFO09251.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:44:54 Download gff for
UFO09251.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)35Di-RB | 70..495 | 1..426 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:09:59 Download gff for
UFO09251.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)35Di-RA | 94..460 | 1..366 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:57:39 Download gff for
UFO09251.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)35Di-RA | 94..460 | 1..366 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:57:39 Download gff for
UFO09251.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15750493..15750651 | 264..422 | 100 | <- | Minus |
| 2L | 15750722..15750985 | 1..263 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:09:59 Download gff for
UFO09251.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15750493..15750651 | 264..422 | 100 | <- | Minus |
| arm_2L | 15750722..15750985 | 1..263 | 98 | | Minus |
