UFO09263.5prime Sequence
1099 bp (987 high quality bases) assembled on 2011-08-17
> UFO09263.5prime
CAGTCGACATGCTGATCAACCGACATTCCTGTTCGAAACTACTTTCTTTG
ATGGTTTTGCTGTGCTTGGCATTTGACTTAAAACCAGTCTCGGCGATGAA
GTGTCGCCTTGGATTTGTAAAAAGGGGTGGACAATGCACTTGGCCTGCAA
GCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAAT
CATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTC
ATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGA
GCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATC
AACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACT
CATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCA
TCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTC
GCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGT
CCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTG
GCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAG
GTTTTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACTGCC
GGAAATCGTCGTGGTATTCACTCCAGAGCGATGAAAACGTTTCAGTTTGC
TCATGGAAAACGGTGTAACAAGGGTGAACACTATCCCATATCACCAGCTC
ACCGTCTTTCATTGCCATACGAAATTCCCGGATGAGCATTCATCAGCGGG
CAAGATGTGAATAAAGGCCGGATAAACTTGTGCTTATTTTTCTTTACGTC
TTTAAAAAGCCGTATATCCAGCTGAACGGTCTGGTTATAGGTACATTGAG
CACTGACTGAAATGCCTCAAATGTTCTTTACGATGCATTGGATATATCAC
GGTGTATTTTCAGTGATTTTTTTCTCCATTAGCTCCTTAGCTCTGAAGAT
CATACTCGTATAGCTACATACGAAGTTAGATTCATATTATTTGAAGCAT
UFO09263.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:04:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Acp54A1-RA | 306 | CG34098-RA | 79..216 | 9..146 | 690 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:04:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17133523..17133660 | 9..146 | 690 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 00:04:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| transib1 | 2167 | transib1 TRANSIB1 2167bp | 232..299 | 715..782 | 123 | 68.1 | Plus |
UFO09263.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:44:59 Download gff for
UFO09263.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp54A1-RA | 59..206 | 1..150 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:10:38 Download gff for
UFO09263.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp54A1-RA | 59..206 | 1..150 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:58:09 Download gff for
UFO09263.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp54A1-RA | 72..219 | 1..150 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:58:09 Download gff for
UFO09263.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17133516..17133660 | 1..146 | 97 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:10:38 Download gff for
UFO09263.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13021021..13021165 | 1..146 | 97 | == | Plus |
