UFO09264.5prime Sequence
1124 bp (1001 high quality bases) assembled on 2011-08-17
> UFO09264.5prime
CAGTCGACATGGTCGTGGCAGCATCCACCTGCCGCACGGAGACGGTCTTC
GATTACAGCTGGATGAACGTGGTGGTCGCCTACTGGAACCGCTACCCGAA
TCCCTCAAGCACGCACGTCCTCACCGAGGACACTATTCAGCGGGAGGTGC
GCGATGGCAAGCTCTTCTCGCGCCGGCTGCTCTCCAAGACGAATCCGGTG
CCGAAGTGGGGAGCTCGCTTCTACAACAATGTGCCGGTCAAGATTGTTGA
GGACTCCGTGCTGGACCCGGTTAAAAAGACATTCACCACTTTCACCAGGA
ACCTGGGAATGACCAAGATAATGAAAGTCGATGAAATTGTCGTCTACAGC
GAGCAGAAGGATGGTAGTACTCTGGCGGTGCGAAGAGCATACATTAGTTC
GCAGGTGTTCGGATTCTCGCGGGCCATTCGCGCCTTCGGCATCGAACGGT
TTAAGGCCAATGGCAACAAGGCCTCCAATGGATTCAACTACGTGCTGCGG
CGCATGTTTCCGGACAGTTTGGTTGGTGGAGGACATCACCAGCACGCGGT
GACGACGACTTCGCCAGCTGGAGAACTTCCTGCAACGACCATCACCGTAT
CCACAACAAACGGCAGTCTCAACAACCAAGGAGCTCTCAAGAGCGCCGCA
AAAGTGGGCTACGAGTTCTTCAAGAGTCATGCCTCCAAGATTGCGCAACT
GTTTTCTGTCAAGAACGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGG
CCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAAC
TAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAA
AAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTG
AGTCATTACTGATCTATCAACAGAGTCCAAGCGAGCTCGATTATCAAATT
ACGCCCGCCTGCACCTCATCGCAGTACTGTTGTATTCATTAAGCATTTCT
GCGACATGAAAGCCATACACAAAACGGCATGATGAACCTGAATCGCCAAC
CGCATCAGCACCTTGTCGCTTGGCGTATTATATTTGCCATTGATGAAACG
GGGGCGAGAGTTGTCGTATTTGGC
UFO09264.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:04:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| prel-RB | 1547 | CG8806-RB | 370..1079 | 7..716 | 3550 | 100 | Plus |
| prel-RC | 1550 | CG8806-RC | 373..1082 | 7..716 | 3550 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:04:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9425246..9425639 | 323..716 | 1970 | 100 | Plus |
| 2R | 25286936 | 2R | 9424599..9424915 | 7..323 | 1585 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:04:18 has no hits.
UFO09264.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:45:00 Download gff for
UFO09264.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| prel-RB | 380..1095 | 1..716 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:10:42 Download gff for
UFO09264.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| prel-RC | 367..1082 | 1..716 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:58:13 Download gff for
UFO09264.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| prel-RC | 367..1082 | 1..716 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:58:13 Download gff for
UFO09264.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9424593..9424915 | 1..323 | 99 | -> | Plus |
| 2R | 9425247..9425639 | 324..716 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:10:42 Download gff for
UFO09264.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5312098..5312420 | 1..323 | 99 | -> | Plus |
| arm_2R | 5312752..5313144 | 324..716 | 100 | == | Plus |
