UFO09265.5prime Sequence
1128 bp (1012 high quality bases) assembled on 2011-08-17
> UFO09265.5prime
CAGTCGACATGGCCAACGATCCCGGTAAGCCGGAAAAGTCCAGGCCACGC
TTCTGCACCCTGTTGAACCATGAGGTCGTCGATCCCAAAGAGTTCATGGT
GCACTTCGCCAAGCGGAGGAAGAATGAAATCATAATCCAGGGTCAGGTCT
GCGGTTGGTGCTACAACATAGATTACTTAAAAGATGAAAAAACAAAGTTC
AAGAAGAAGCGGCCCAATCTTTCGGATGCGAGCGTCACCAAGCAGCGCGC
CACCTCACCACGAAGAGGAGCAATTGCAGACAACCCTCGTCAATTGGGTG
GTGATCAGCACTGCTCGGAAAAGAGTTTTGCGCCCTCTGGTGACGAAATA
CCCACACCACGTGATTTGAAGGACAAACCTGGTGACCTTGCCGCAAGCTT
TCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATA
ATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGA
CTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGT
TCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACA
GGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATC
GCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCAC
AAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCT
TGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCAT
ATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTG
AGACGAAAAACATATTCTCAATAAACCCTTTAGGGAATAGGCCAGGTTTT
CACCGTAACACGCCACATCTTGCGAATATATGTGTAGAACTGCCGGAAAT
CGTCGTGGTATCACTCCAAAGCGATGAAACGTTTCAGTTTGCTCATGAAA
CGGTGTACAAGGTGACACTATCCCATATCACAGCTCACCGTCTTCATGCA
TACGAATCGATGACATTCATCAGCGGCAGATGTATAAGCCGGAATAAACT
GTGCCTAATTTCCTTACGGCTTAAGTCC
UFO09265.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:04:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13540-RB | 528 | CG13540-RB | 53..436 | 9..392 | 1920 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:04:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23270584..23270967 | 9..392 | 1920 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:04:27 has no hits.
UFO09265.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:45:00 Download gff for
UFO09265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13540-RA | 1..388 | 9..397 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:10:47 Download gff for
UFO09265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13540-RB | 46..440 | 1..397 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:58:16 Download gff for
UFO09265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13540-RB | 46..440 | 1..397 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:58:16 Download gff for
UFO09265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23270575..23270967 | 1..392 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:10:47 Download gff for
UFO09265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19158098..19158490 | 1..392 | 98 | == | Plus |
