UFO09268.5prime Sequence
1120 bp (1012 high quality bases) assembled on 2011-08-17
> UFO09268.5prime
CAGTCGACATGCGGTACTATGAAGATCCATGTGGCTATCCTCCTCGCCAT
CACCATGGTCGTCCAAATATCGAAATTGATGTGGTTCCCGGTTGGGGTGG
CGGCTACTATCCGCCGCCGCCTCCGCCTCGGCCCGCCGAGGTAGTCTACA
TGACCCCGGCGGCTACCTATGTGCCCGGCACACAGGTGATAATGCCGCAA
CCCTACGGCGGCGTCACGGTGGCCACCACCAATGGATACTATCCGCAGCA
GCAGCAGCAGGCGTACGAGTATCAGTACCAGTATCAGCAGCCCTACAACA
ATCCACCGTATCCGCAGTGGGCAAGCTTTCTAGACCATTCGTTTGGCGCG
CGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCA
CAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAA
TAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGT
TCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATAT
CAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTA
AGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAAT
CGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGG
TGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAA
CTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAAT
AAACCCTTTAGGGAAATACGCCAGGTTTTCACCGTAACACGCCACATCTT
GCGAATATATGTGTAGAAACTGCCGGAAATCGTCGTGTATTCACTCCAGA
GCGATGAAAACGTTTCAGTTTGCTCATGGAAACGTGTAACAAGGGTGAAC
ACTATCCATATCACAGCTCACGTCTTTCATGCATACGAAATCGATGAGCA
TTCATCAGGCGGGCCAGATTGTGAATAAAGCGAAAAACTTGTGCTTATTT
TTCTTTACGGTCTTAAAAGCGTAATTTCCAGCTGAACGGTCTGTTATAGG
TTCTGGACCAACCTGACTGA
UFO09268.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:04:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15422-RA | 687 | CG15422-RA | 73..384 | 9..320 | 1560 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:04:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4005056..4005367 | 9..320 | 1560 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 00:04:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2344..2419 | 241..316 | 145 | 68.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6809..6868 | 246..304 | 117 | 68.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6845..6897 | 246..300 | 117 | 73.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6734..6807 | 246..316 | 110 | 64.9 | Plus |
UFO09268.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:45:01 Download gff for
UFO09268.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15422-RA | 64..388 | 1..324 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:10:56 Download gff for
UFO09268.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15422-RA | 64..388 | 1..324 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:58:23 Download gff for
UFO09268.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15422-RA | 64..388 | 1..324 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-27 00:58:23 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 16:10:56 has no hits.
