UFO09281.5prime Sequence
1112 bp (977 high quality bases) assembled on 2011-08-17
> UFO09281.5prime
CAGTCGACATGTTCAAGCTGTCTGCCCTCGTTGTCCTGTGCGCTCTGGTG
GCCTGCTCCTCGGCTGAGCCCAAGCCCGCTATCCTGGCCGCCGCTCCAGT
GGTTGCAGCTGCTCCTGCCGGCGTGGTCACCGCTACCAGTTCGCAGTACG
TGGCCCGCAACTTCAACGGTGTGGCTGCTGCTCCAGTTGTTGCCGCTGCC
TACACCGCTCCAGTTGCCGCCGCTGCCTATACCGCTCCAGTTGCCGCCGC
TGCTTATACCGCTCCAGTTGCCGCTGCCTACTCTGCTTATCCGTATGCCG
CCTACCCTTACAGCGCTGCATACACCACTGTTTTGGCAAGCTTTCTAGAC
CATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAA
TCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGC
TTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAAC
AAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCC
AAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTAC
TGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGC
ATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTAT
AATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCC
ACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAA
AAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGT
AACACGCCACATCTTGCGAATATATGTGTAGAAACTGCCGGAATCGTCGT
GTATTCACTCCAGAGCGATGAAACGTTTCAGTTTGCTCATGAAAACGTGT
AACAGGTGAACACTATCCATATCACAGCTCACGTCTTTCATGCAATACGA
AATTCGATGACATCATCAGGCGGCCAGAATGTGAAATAGCGATAACTGGT
GCTTATTTTCTTACGTCTTAAAAGGCGTAATATCAGCTGACGGTTGTTTA
GTCAGACACTGA
UFO09281.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:56:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13068-RA | 450 | CG13068-RA | 43..370 | 8..335 | 1640 | 100 | Plus |
| CG13674-RB | 559 | CG13674-RB | 251..333 | 193..281 | 220 | 85.4 | Plus |
| CG13674-RA | 687 | CG13674-RA | 251..333 | 193..281 | 220 | 85.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:56:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16269516..16269831 | 20..335 | 1580 | 100 | Plus |
| 3L | 28110227 | 3L | 16269676..16269743 | 207..274 | 280 | 94.1 | Plus |
| 3L | 28110227 | 3L | 16269703..16269770 | 180..247 | 280 | 94.1 | Plus |
Blast to na_te.dros performed 2014-11-26 23:56:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2434..2539 | 275..170 | 134 | 62.4 | Minus |
UFO09281.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:44:28 Download gff for
UFO09281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13068-RA | 40..373 | 1..339 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:06:54 Download gff for
UFO09281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13068-RA | 40..373 | 1..339 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:55:07 Download gff for
UFO09281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13068-RA | 40..373 | 1..339 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-27 00:55:07 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 16:06:54 has no hits.
