Clone UFO09282 Report

Search the DGRC for UFO09282

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:92
Well:82
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG13675-RC
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO09282.5prime Sequence

1108 bp (989 high quality bases) assembled on 2011-08-17

> UFO09282.5prime
CAGTCGACATGGCAGCCACAACAACAGCAGCGAACAAATCACCGCAGCAG
CAGCAACACAGACGGCAGCAGCATCTTCAGTGGAGCGCCTGCATTATGAT
AGTCGTGTTCGGACTGTTTTCGATGCTGGCCGGGAACTGTGTCAATGGGC
AAATCGATGGCTACACAGCTGGTGAGGATTACCCCGCCTACGACGCCGTG
CCAAAGGGTCTGGCCTTCAATTGCCAGGGTCGCCAGCCGGGTTACTATGC
GGACACAGAGACGCGTTGTCAGGTCTGGCATTGGTGCCTCCACTCGGGCC
ATCAGTACTCCTTCCTCTGCCCAAATGGAACCGTATTCAACCAGGCCGTC
AGGGTCTGCGACTGGTGGTCGAATGTGAACTGCGAGGGATCAGAGCAACT
CTACCAGAACAACGACGAACTGTATCGCATCCCAGAGCGCCAGCAGCAGC
TGAATGATGTAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAG
GTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCC
TAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACG
CCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTC
ATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACG
CCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTG
CCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGG
CATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGG
GGGCGAAGAGTTGTCCATATTGCCACGTTTAATCAAAACTGGTGAAACTC
ACCCAGGATTGGCTGAGACGAAAACATATTTCTCATAACCCTTTAGAAAT
AGCCAGGTTTCACCGTACACGCCACATCTGCGAATATATGTGTGTAGACT
GCGGAATCGTCTGTATTCCCTCCAGAGCGATGAAACGTTCAGTTGCTCAT
TGAACGGTGTAACAGGTGACCTTTCCATATCCCCAGGCTCACGCTCTTCA
TGCCATCG

UFO09282.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:56:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG13675-RD 1494 CG13675-RD 187..640 8..461 2270 100 Plus
CG13675-RC 1399 CG13675-RC 92..545 8..461 2270 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:56:30
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8161169..8161359 461..271 955 100 Minus
3L 28110227 3L 8164220..8164361 149..8 710 100 Minus
3L 28110227 3L 8161421..8161546 274..149 630 100 Minus
Blast to na_te.dros performed on 2014-11-26 23:56:31 has no hits.

UFO09282.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:44:28 Download gff for UFO09282.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13675-RC 85..545 1..461 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:06:58 Download gff for UFO09282.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13675-RC 85..545 1..461 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:55:10 Download gff for UFO09282.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13675-RC 85..545 1..461 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:55:10 Download gff for UFO09282.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 8161172..8161357 273..458 100 <- Minus
3L 8161423..8161545 150..272 100 <- Minus
3L 8164220..8164368 1..149 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:06:58 Download gff for UFO09282.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8154272..8154457 273..458 100 <- Minus
arm_3L 8154523..8154645 150..272 100 <- Minus
arm_3L 8157320..8157468 1..149 98   Minus