UFO09282.5prime Sequence
1108 bp (989 high quality bases) assembled on 2011-08-17
> UFO09282.5prime
CAGTCGACATGGCAGCCACAACAACAGCAGCGAACAAATCACCGCAGCAG
CAGCAACACAGACGGCAGCAGCATCTTCAGTGGAGCGCCTGCATTATGAT
AGTCGTGTTCGGACTGTTTTCGATGCTGGCCGGGAACTGTGTCAATGGGC
AAATCGATGGCTACACAGCTGGTGAGGATTACCCCGCCTACGACGCCGTG
CCAAAGGGTCTGGCCTTCAATTGCCAGGGTCGCCAGCCGGGTTACTATGC
GGACACAGAGACGCGTTGTCAGGTCTGGCATTGGTGCCTCCACTCGGGCC
ATCAGTACTCCTTCCTCTGCCCAAATGGAACCGTATTCAACCAGGCCGTC
AGGGTCTGCGACTGGTGGTCGAATGTGAACTGCGAGGGATCAGAGCAACT
CTACCAGAACAACGACGAACTGTATCGCATCCCAGAGCGCCAGCAGCAGC
TGAATGATGTAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAG
GTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCC
TAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACG
CCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTC
ATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACG
CCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTG
CCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGG
CATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGG
GGGCGAAGAGTTGTCCATATTGCCACGTTTAATCAAAACTGGTGAAACTC
ACCCAGGATTGGCTGAGACGAAAACATATTTCTCATAACCCTTTAGAAAT
AGCCAGGTTTCACCGTACACGCCACATCTGCGAATATATGTGTGTAGACT
GCGGAATCGTCTGTATTCCCTCCAGAGCGATGAAACGTTCAGTTGCTCAT
TGAACGGTGTAACAGGTGACCTTTCCATATCCCCAGGCTCACGCTCTTCA
TGCCATCG
UFO09282.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:56:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13675-RD | 1494 | CG13675-RD | 187..640 | 8..461 | 2270 | 100 | Plus |
CG13675-RC | 1399 | CG13675-RC | 92..545 | 8..461 | 2270 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:56:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 8161169..8161359 | 461..271 | 955 | 100 | Minus |
3L | 28110227 | 3L | 8164220..8164361 | 149..8 | 710 | 100 | Minus |
3L | 28110227 | 3L | 8161421..8161546 | 274..149 | 630 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:56:31 has no hits.
UFO09282.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:44:28 Download gff for
UFO09282.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13675-RC | 85..545 | 1..461 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:06:58 Download gff for
UFO09282.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13675-RC | 85..545 | 1..461 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:55:10 Download gff for
UFO09282.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13675-RC | 85..545 | 1..461 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:55:10 Download gff for
UFO09282.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 8161172..8161357 | 273..458 | 100 | <- | Minus |
3L | 8161423..8161545 | 150..272 | 100 | <- | Minus |
3L | 8164220..8164368 | 1..149 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:06:58 Download gff for
UFO09282.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 8154272..8154457 | 273..458 | 100 | <- | Minus |
arm_3L | 8154523..8154645 | 150..272 | 100 | <- | Minus |
arm_3L | 8157320..8157468 | 1..149 | 98 | | Minus |