UFO09283.5prime Sequence
1155 bp (1039 high quality bases) assembled on 2011-08-17
> UFO09283.5prime
CAGTCGACATGGCACCCAATCGCAAGGACGGAAAGAAGAATATTACGGAA
AAGCAGGAAGCGAAAATGTTAGCCGAAGCTGGTGGAAAATCGGCCAGTGA
TAGCGATGCGAGCGATACCGAATGGCAAATGGTTCAATTTGTGGACGATC
CGAATGTCCTGCGAGTTGCGATCATAGCTTGTCCTGAGGTGACCTTGGGC
TTTTTACTGTGTGGCGTTGGCTATCAGAAGGATAGATTTCGCAACTATAT
GATGGTTGAGAGCGAGACGCCACAAGAGGATGTGGAGCAGTTCTTTCTCA
CGGTTTACAGGAGATCCAATATCGGCATTGTCATCATCGACTACGATACG
GTGAAAAGGCTTCGTACCATGATGCAACGATGTTCTCAGCTGCTTCCCGT
CCTGGTCACGGTGCCCAACAAATCCTCACTGATCACGTACTTGGACAAAA
AGGAGCGAAATCGGCGACTTCGCCAGCGTGATGCCTATGCAAGCTTTCTA
GACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCA
TAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAG
TGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTG
AACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAG
TCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAG
TACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAAC
GGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCG
TATAATATTTGCCCATGGTGAAACGGGGGCGAAGAGTTGTCCATATTGGC
CACGTTTAAATCAAACTGGTGAACTCACCCAGGGATGGCTGAGACGAAAA
CATATTCTCAATAACCCTTTAGGAATAGCCAGGTTTCACCGTAACACGCC
ACATCTGCGAATATATGGTGTAGAACTGCCGGAATCGTCGTGTATCACTC
AGAGCGATGAAACGTTTCAGTTGCTCATGAACGGTGTAACAGGGTGACCT
ATCCATATCACAGCTCACGTCTTTCATGCTCGAATCCGGTGACTCACAGC
GTCAG
UFO09283.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:56:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15719-RD | 747 | CG15719-RD | 70..549 | 9..488 | 2400 | 100 | Plus |
| CG15719-RC | 717 | CG15719-RC | 40..519 | 9..488 | 2400 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:56:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13004153..13004377 | 488..264 | 1125 | 100 | Minus |
| X | 23542271 | X | 13004567..13004744 | 186..9 | 890 | 100 | Minus |
| X | 23542271 | X | 13004430..13004508 | 264..186 | 395 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:56:39 has no hits.
UFO09283.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:44:29 Download gff for
UFO09283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15719-RB | 1..489 | 9..498 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:07:03 Download gff for
UFO09283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15719-RC | 33..528 | 1..498 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:55:13 Download gff for
UFO09283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15719-RC | 33..528 | 1..498 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:55:13 Download gff for
UFO09283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13004153..13004376 | 265..488 | 100 | <- | Minus |
| X | 13004430..13004508 | 186..264 | 100 | <- | Minus |
| X | 13004568..13004750 | 1..185 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:07:03 Download gff for
UFO09283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 12898186..12898409 | 265..488 | 100 | <- | Minus |
| arm_X | 12898463..12898541 | 186..264 | 100 | <- | Minus |
| arm_X | 12898601..12898783 | 1..185 | 97 | | Minus |
