UFO09286.5prime Sequence
1127 bp (1002 high quality bases) assembled on 2011-08-17
> UFO09286.5prime
CAGTCGACATGATGATTTCAGACAGTCAGAAGAAAGGACTGCGGGAGTTA
CTTCTAAATGACAAGAACTTAACTGTTCTGCTACAGTTGGCCAAAGGGGC
CACCAAAAATATGTGCAAAACCGAAGACCCGGAGGAGGCCCTTCGTCTGA
TCACTACACACATTCCAGACATTTACGTACTGCTTTCCAAGCGCGCTATA
AAAAAGGAACTCCTCTTTACGTATTTGAGCAATCGACGCGCTGACGCAGC
CACAGACTTTAGCAAGGCAGACCTCATAGCCAAGGTTATACAGTATTGGA
AGCAGGAGCATAAATCAAGCATAGAGCTTTCCGGAGACCAGACTTCCAGC
TCACTTCATATTCAGAGCGAAGAGGATTATCCCATTCACACGATTGCCCG
CAAGTTCGGCGAGTGGTTCTTCGAACGCTTCAACGCAGACGCCCTTAGTC
TGGTGGATTTATGGGCAGATGCGGCTCTACATCTCACGATCATAGCCAGT
GATGGAATCAATGAGTGGGAGTGTACGACGGCTGCCGAGGTGTTATCGGC
ACTAACGAGCGCTAAGCAGCAGTTTGACTTTTACTTTAATCCAAACCTGA
CGCACGCCGGAATTCAGGGTCGAATGGACTCGTACGGACATTTCTTAGTG
ATCTGCTGCGGCACTCTGCACTCCCGTGATAGCTGCGTCGGAATCTTTGA
ATGTGCCTTCGGGCTTTTTCGGGACCCCTTGGCTGACAACAACTGGAAAC
CCAAAAAGTGAAGTGCTTCCTTAAAAGTGAAGCTCAGCCCCCAGAGCTGC
ACTATCTGTGCTCGAGCGAAACTCTGCAGACAGCTCTGGAGCTGTCAGTA
CCCTCTGATGACTTGAACGCAAGCTTTCTAGACCATTCGTTTGGCGCGCG
GGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACA
ACTAGCCTAGAGATCCTGGTCATGACTAGTGCTTGGATTCTCCACAATAA
AAACGCCCGGCGGCACCGAGCGTTCTGAACATTCCAGATGAGTTCTGGAG
TCATTACTGGATCTATCCACGAGTTCAGCGAGCCTCGATATCAATACGCC
CCGCCTGCCACTCCATGCCAGATACTG
UFO09286.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:56:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13876-RA | 1337 | CG13876-RA | 55..919 | 5..868 | 4300 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:56:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 206375..207109 | 135..868 | 3625 | 99.9 | Plus |
| 3L | 28110227 | 3L | 206188..206318 | 5..135 | 655 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:56:57 has no hits.
UFO09286.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:44:30 Download gff for
UFO09286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13876-RA | 50..923 | 1..874 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:07:12 Download gff for
UFO09286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13876-RA | 50..923 | 1..874 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:55:22 Download gff for
UFO09286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13876-RA | 50..923 | 1..874 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:55:22 Download gff for
UFO09286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 206183..206318 | 1..135 | 97 | -> | Plus |
| 3L | 206376..207116 | 136..883 | 98 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:07:12 Download gff for
UFO09286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 206183..206318 | 1..135 | 97 | -> | Plus |
| arm_3L | 206376..207116 | 136..883 | 98 | <- | Plus |
