UFO09287.5prime Sequence
877 bp (840 high quality bases) assembled on 2011-08-17
> UFO09287.5prime
CAGTCGACATGGATAGGGGTACGTCTTCAAATCAGCCCATCCTGACCACC
TGTGAGATGTATCCGCGCCGAAGGAACACGGAGTTCTACAGATCCCCGGA
ACCGAGAGTCTCCTGCCAAAACCAACGAGCGGAACATCCGGGGCAGATGC
TCAACGTGACTCCCGACGAGAATCGGGAGGCCGTACGAAGACTTCCACGA
ATCCAGCCGCCAAATAATTTGGATAGTGTTTATCTACGCAATGGTTACTT
TTCGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTG
GTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGA
TCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCG
GCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTG
GATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCC
CTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACAT
GGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGC
ACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAA
GAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCC
AGGGATTGGCTGAGACGAAAAACATATTCTCAATAACCCTTTAGGGAAAT
AGGCCAGGTTTTCACCGCACACGCCCCATCTTGCGATATATGTGTAGAAA
CTGCCGGAAATCCTCGTGGTATTCATTCCAGAGCGATGAAACCGTTTCAT
TTTGCTCATGAAAACGGTTTAACAAGG
UFO09287.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:57:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34241-RA | 427 | CG34241-RA | 120..366 | 8..254 | 1235 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:57:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12128185..12128400 | 39..254 | 1080 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:57:06 has no hits.
UFO09287.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:44:31 Download gff for
UFO09287.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34241-RA | 75..324 | 8..258 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:07:15 Download gff for
UFO09287.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34241-RA | 120..369 | 8..258 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:55:25 Download gff for
UFO09287.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34241-RA | 120..369 | 8..258 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:55:25 Download gff for
UFO09287.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12128185..12128400 | 39..254 | 100 | == | Plus |
| 3L | 12128098..12128128 | 8..38 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:07:15 Download gff for
UFO09287.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12121198..12121228 | 8..38 | 100 | -> | Plus |
| arm_3L | 12121285..12121500 | 39..254 | 100 | == | Plus |
