UFO09301.5prime Sequence
691 bp (568 high quality bases) assembled on 2011-08-15
> UFO09301.5prime
CAGTCGACATGGTACGCACTAAAAACCAGTCGTCCTCCTCCAGCGCCAGC
AGCAGCAGCACCAAGTCACCAATAAAGTCCAGCAGCGGGGCAGGATCATC
CGGCGGAGGACTCGGTGGTCGCCAGTCCACTCACCGCTCGTCGAGCGCCT
CAAACGTTGCTGCCGTTGTTGCCGGCGGTTCATCTGCCGCCGGTGGAGGC
TCCTCATCGAATCGCCGTAGTCCGGGCAGCTCACCCGACGGCGACGACGA
CACCACCACCACAGATGACCTGACCCCCACAACGTGCTCCCCACGCAGCG
GCCACCACCATTCGTACGGCGGCTACTCGTCCTCTGTGCACAAACAGAAC
CTCTACGTCGTCTCGTTCCCCATAATCTTTCTTTTCAACGTTCTGCGCTC
GCTGATTTATCAGCTGTTTTGTATTTTTCGCTACCTATACGGTGCGAGCA
CAAAGGTGATATACCGCCCGCACCGACGCGACTGTAAATTTTTGAAATTC
GGTGGGTGGCAAAAATTCCCTCCCAGGGGAACCAACAGCCAGTCCGTTGA
AACCCTTCCCTTTCGGAGACCTGAAAACCGGGGAAAGGGGAACGGGAAAA
GGAAAAACCCCCGTTTTTTTTTTAATTTCGCCAAACCGGGGTTTTTTTAG
GGGCCCCTTTTTAACCCGTGTGAAAAAAGAGGGCCCCCACA
UFO09301.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:51:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| spas-RD | 3743 | CG5977-RD | 295..773 | 9..487 | 2395 | 100 | Plus |
| spas-RC | 3147 | CG5977-RC | 295..773 | 9..487 | 2395 | 100 | Plus |
| spas-RB | 2791 | CG5977-RB | 295..773 | 9..487 | 2395 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:51:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24038509..24038987 | 9..487 | 2395 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 23:51:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TART-A | 13424 | TART-A 13424bp | 8621..8655 | 28..62 | 112 | 80 | Plus |
UFO09301.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:43:51 Download gff for
UFO09301.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| spas-RA | 287..784 | 1..505 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:04:28 Download gff for
UFO09301.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| spas-RA | 290..787 | 1..505 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:53:10 Download gff for
UFO09301.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| spas-RB | 290..787 | 1..505 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:53:10 Download gff for
UFO09301.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24038504..24039001 | 1..505 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:04:28 Download gff for
UFO09301.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19864226..19864723 | 1..505 | 98 | == | Plus |
