UFO09303.5prime Sequence
266 bp (213 high quality bases) assembled on 2011-08-15
> UFO09303.5prime
CAGTCGACATGCGGCCAGGACCCGGGCTGGTCGTGATGGCGCTTGCGTTT
ATTTCGGGGGCTCGGCGTGGCAGCAGCAGCAGCATCAGCTCAGCAACAGC
AACACCAACAGCGGCAGCAACATCTGCAGCAGCAGCAGCGGCAGCAGCAG
CAACATCCGCAGCATCAACATCCGCAGCAGCAGCAGCAGCAGCAATACAG
CAGCGGTCGTAAAAAAGCAGAGTGCGGCGGAGCCGAGCGAGATTGAACAG
TTACGTCACTGCAGCG
UFO09303.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:51:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mid1-RB | 8297 | CG33988-RB | 606..813 | 9..214 | 975 | 98.6 | Plus |
| Mid1-RA | 4730 | CG33988-RA | 606..813 | 9..214 | 975 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:51:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24726412..24726598 | 195..9 | 935 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:51:25 has no hits.
UFO09303.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:43:52 Download gff for
UFO09303.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33988-RA | 592..809 | 1..214 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:04:31 Download gff for
UFO09303.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33988-RA | 596..813 | 1..214 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:53:12 Download gff for
UFO09303.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mid1-RA | 596..813 | 1..214 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:53:12 Download gff for
UFO09303.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24726375..24726604 | 1..227 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:04:31 Download gff for
UFO09303.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20613898..20614127 | 1..227 | 94 | | Minus |
