UFO09305.5prime Sequence
1122 bp (1024 high quality bases) assembled on 2011-08-15
> UFO09305.5prime
CAGTCGACATGGGCGAAGAACTCCCGATATTGAAGGGCATACTTAAAGGC
AACGTCAACTATCACAATGCGCCTGTGCGTTTTGGACGCGTGCCGAAGCG
CGAAAAGGCGCGTATCCTGGCGGCCATGCAACAGAGCACCCAGAATCGCG
GCCAGCAGCGAGCCCTCGCCACCGAGCTGGATGACCAGCCACGCCTCCTC
GCCGCCGTGCTGCGCGCCCACCTCGAGACCTGTGAGTTCACCAAGGAGAA
GGTCTCGGCGATGCGGCAGCGGGCGCGGGATTGCCCCTCCTACTCCATGC
CCACACTTCTGGCCTGTCCGCTGAACCCCGCCCCTGAACTGCAATCGGAG
CAGGAGTTCTCGCAGCGTTTCGCCCACGTAATTCGCGGCGTGATCGACTT
TGCCGGCATGATTCCCGGCTTCCAGCTGCTCACCCAGGACGATAAGTTCA
CGCTCCTGAAGGCGGGACTCTTCGACGCCCTGTTTGTGCGCCTGATCTGC
ATGTTTGACTCGTCGATAAACTCAATCATCTGTCTAAATGGCCAGGTGAT
GCGACGGGATGCGATCCAGAACGGAGCCAATGCCCGCTTCCTGGTGGACT
CCACCTTCAATTTCGCGGAGCGCATGAACTCGATGAACCTGACAGATGCC
GAGATAGGCCTGTTCTGCGCCATCGTTCTGATTACGCCGGATCGCCCCGG
TTTGCGCAACCTGGAGCTGATCGAGAAGATGTACTCGCGACTCAAGGGCT
GCCTGCAGTACATTGTCGCCCAGAATAGGCCCGATCAGCCCGAGTTCCTG
GCCAAGTTGCTGGAGACGATGCCCGATCTGCGCACCCTGAGCACCCTGCA
CACCGAGAAACTGGTAGTTTTCCGCACCGAGCACAAGAGCTGCTGCGCCA
GCAGATGTGGTCCATGGAGGACGGCAACAACAGCGATGGCCAGCAGAACA
AGTCGCCCTCGGGCAGCTGGGCGGATGCCATGGAACGTGGAGGCGGCAAA
AGTCCGCTTGGCTCGGTATCAGGCACTGAGTCGCCCGACCTGACTACGCA
GTTCTGAGCAGTTTCCAGCACAAGGGTGTTTCCTGCCCTCGCCGCCTCAA
CACAAGCTTCAGGTACCTGAGG
UFO09305.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:51:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Eip75B-RD | 3750 | CG8127-RD | 747..1840 | 9..1099 | 5110 | 98.3 | Plus |
| Eip75B-RG | 3876 | CG8127-RG | 937..1966 | 73..1099 | 4790 | 98.2 | Plus |
| Eip75B-RF | 8236 | CG8127-RF | 2892..3921 | 73..1099 | 4790 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:51:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17955433..17956229 | 1099..306 | 3470 | 97.1 | Minus |
| 3L | 28110227 | 3L | 17959381..17959620 | 312..73 | 1200 | 100 | Minus |
| 3L | 28110227 | 3L | 17961005..17961068 | 72..9 | 320 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:51:34 has no hits.
UFO09305.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:43:53 Download gff for
UFO09305.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eip75B-RD | 747..1759 | 9..1020 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:04:36 Download gff for
UFO09305.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eip75B-RD | 747..1759 | 9..1020 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:53:14 Download gff for
UFO09305.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eip75B-RD | 747..1759 | 9..1020 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:53:14 Download gff for
UFO09305.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17955514..17956223 | 312..1020 | 99 | <- | Minus |
| 3L | 17959382..17959620 | 73..311 | 100 | <- | Minus |
| 3L | 17961005..17961068 | 9..72 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:04:36 Download gff for
UFO09305.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17948614..17949323 | 312..1020 | 99 | <- | Minus |
| arm_3L | 17952482..17952720 | 73..311 | 100 | <- | Minus |
| arm_3L | 17954105..17954168 | 9..72 | 100 | | Minus |
