UFO09308.5prime Sequence
1088 bp (996 high quality bases) assembled on 2011-08-15
> UFO09308.5prime
CAGTCGACATGCTGAAAATGGCAATGGCAAATGGTGCAAATCCGCTGCAA
ACAATGAAGAAAGCAAACGGCGACGAGGAGTCCGATGAGTCCGATATGGA
AGAAGAGGAGGAGGATGAGGAAGACGAGGAGGAGGACGATCTGCCGGATG
TAGCACTCCAAATCGACAGCGAGGATGAGGCGGAACTGGAGGCGCAGCGC
ATTCGTTTGGTGGAAGAAGAAGCAGCCAAGACAACAAAAAAGGCCGAGAA
AGAACGGCAGCAGCTGCAACAAAAACAACAACGGCAAGCGCAGGTCAGTA
ACGGTAACGAAGAGCAGCTGGAGGAAACTCAAAAACCCAGCAACAACAAA
CGCAAGGCCCGTGGGAGGCCAAAACGCAAGATATCCACTAGCTCGCAGGC
CTCCAGTGCCTCCATCGCCTCCAGTGCTACCTTGGTGGCCGCTCAAGTTC
TCGCAGATCAGAAGTCACGCCGCTTCATCTACAGCTGTACCAGCTGCACA
CACCACTACGACGACAACCTGATCCTGTCCAGACACTTCCAGCTGGAGCA
TGTCGAGAAATCGAAAAGGAAGCGAGGCAAAACCAAGGCTGCTGCTGAAG
AACCCATGGTTACTCCTCCCTTGATCATTGATCCCTTGGAAATGGGCCAA
CTTAAGCCCTGCGCCCAGTTGCTTGTCCAAGGAGAATCCGTGCTGCAATT
ATGCCTCGCCTGTAATTCACAGTTTGTGGATGTGGTACGCTTTCAGGAGC
ATCTTAGCCAGCAGCATGGCTATTTTCAGTTGCTGGTGCCCAAGGAGGAA
CCCACCGATCTCCCACCGCATGCCATGGTCACAATTCCCGGGGCTCTGGC
TCTGAACAAGGCCAATGCCCAGCTTCAGCTGCCCATTCCAGCTCCGGAAA
CTCCGCCACCCGAGCAGGACGGCAAGGAGGCTCCACAAGTAACGCGTCCA
ATGACAAGGAGATCTCACATGATCACGACATGGTGGCGGTTATTGCAGCG
AGCGGAGTGAGAAACAGCAGCTCCAGGTCAACAGATGATCATCAACCTCC
TATGCCCAAAAAGAGGCGAAGCGCCATAGCCGAAAGCT
UFO09308.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:51:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7372-RA | 4172 | CG7372-RA | 135..1201 | 6..1062 | 5035 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:51:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15620035..15621032 | 6..999 | 4790 | 99.6 | Plus |
Blast to na_te.dros performed 2014-11-26 23:51:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3292..3321 | 253..282 | 114 | 86.7 | Plus |
UFO09308.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:43:55 Download gff for
UFO09308.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7372-RA | 70..1159 | 1..1074 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:04:43 Download gff for
UFO09308.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7372-RA | 128..1217 | 1..1074 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:53:19 Download gff for
UFO09308.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7372-RA | 128..1217 | 1..1074 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:53:19 Download gff for
UFO09308.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15620028..15621117 | 1..1074 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:04:43 Download gff for
UFO09308.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15613128..15614217 | 1..1074 | 98 | | Plus |
