UFO09314.5prime Sequence
1054 bp (961 high quality bases) assembled on 2011-08-15
> UFO09314.5prime
CAGTCGACATGACGACTGACACCCGCCGACGCGTCAAGCTGTACGCGCTG
AATGCGGAACGGCAATGGGATGATCGTGGCACTGGCCACGTGTCATCCAC
CTATGTGGAAAGACTAAAAGGCATCTCGCTTTTGGTGCGAGCCGAATCCG
ATGGATCTCTACTTTTGGAGAGCAAGATACAACCGGACACCGCATACCAG
AAGCAACAGGATACGCTGATCGTGTGGTCCGAGGGGGATAACTTTGATCT
GGCCCTGAGTTTCCAGGAAAAGGCGGGCTGCGACGAAATATGGGAAAAGA
TATGTCAGGTGCAAGGCAAGGATCCATCTGTAGAAATAACTCAAGACATC
GTCGAAGAGTCTGAGGATGAGCGGTTTGAGGACATGTCGGATACTGCGCC
ACCCATTGAGCTACCACCCTGCGAGCTTTCCCGGCTGGAGGACATCTCGG
AAACGATACAAAGCTGTCTCTCCACGCCGCTGCGAAAGGAAAAGTTGTCG
ATGGCTCTGGAGTCGGAGAGCTATATCAAGAAGCTGCTGAACTTGTTCCA
CGTGTGTGAGGACCTGGACAATACCGAGGGCCTGCATCACCTTTTTGAGA
TCTTCAAGAACATCTTCTTGCTAAATAAGAACGCGCTCTTTGAGATTATG
TTTGCGGATGATACCATCTTTGATGTGGTCGGGTGCCTGGAGTACGATCC
GAGTGTGTCTCAGCCCAAAAAGCATCGACAGTATCTGAAGCAGTTAGCCA
AGTTCCGCGAGGCAGTGCCGATTAAAAACCTGGACCTGCTGGCTAAGATT
CACCAGACGTTCCGGGTGCAGTACATCCAGGACATTATCCTGCCCACACC
ATCGGTCTTTGTCGAAGACACATGCTGAACACCCTGTCCAGCTTCATCTT
CTTCACAGGTGGAGATGTCACGATGATCCAGGACGACGAGCGGTATCTCC
TGGATGTGTTTGCTGTTCTCTACCGATCCCACTACCGGAAGAGCGAAACA
CCCCGACAAAGTTCTCTTCCTTATGAGTTTTGCACTATGCCAGACTGCAG
CGCA
UFO09314.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:52:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| flfl-RE | 3888 | CG9351-RE | 624..1662 | 8..1041 | 4875 | 98.5 | Plus |
| flfl-RD | 5618 | CG9351-RD | 524..1562 | 8..1041 | 4875 | 98.5 | Plus |
| flfl-RB | 3788 | CG9351-RB | 524..1562 | 8..1041 | 4875 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:52:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 13688344..13689062 | 306..1021 | 3265 | 98.2 | Plus |
| 3R | 32079331 | 3R | 13688044..13688235 | 119..310 | 960 | 100 | Plus |
| 3R | 32079331 | 3R | 13687863..13687976 | 8..121 | 570 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:52:09 has no hits.
UFO09314.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:43:58 Download gff for
UFO09314.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| flfl-RD | 481..1525 | 1..1041 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:04:56 Download gff for
UFO09314.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| flfl-RB | 518..1562 | 1..1041 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:53:27 Download gff for
UFO09314.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| flfl-RB | 518..1562 | 1..1041 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:53:27 Download gff for
UFO09314.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 13687857..13687975 | 1..120 | 97 | -> | Plus |
| 3R | 13688046..13688233 | 121..308 | 100 | -> | Plus |
| 3R | 13688347..13689084 | 309..1041 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:04:56 Download gff for
UFO09314.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 9513579..9513697 | 1..120 | 97 | -> | Plus |
| arm_3R | 9513768..9513955 | 121..308 | 100 | -> | Plus |
| arm_3R | 9514069..9514806 | 309..1041 | 97 | | Plus |
