Clone UFO09319 Report

Search the DGRC for UFO09319

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:93
Well:19
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcripttlk-RE
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO09319.5prime Sequence

1130 bp (1011 high quality bases) assembled on 2011-08-15

> UFO09319.5prime
CAGTCGACATGCCTGTGGTAAAACAGCGGAAAATGAGCCGCTTTAAGATG
TCCCCCGGCGCCCATTTGCAGATGTCCCCGCAGAACACTTCGTCCCTAAG
TCAACACCATCCACATCAACAGCAACAGTTACAACCCCCACAGCAGCAAC
AACAGCATTTCCCTAACCATCACAGCGCCCAGCAACAGTCGCAGCAGCAG
CAGCAACAGGAGCAACAGAATCCCCAGCAGCAGGCGCAACAGCAGCAGCA
GATACTCCCACATCAACATTTGCAGCACCTGCACAAGCATCCGCATCAGC
TGCAACTGCATCAGCAGCAGCAACAACAACTCCACCAGCAACAGCAGCAA
CACTTCCACCAGCAGTCGCTGCAAGGGCTGCATCAGGGTAGCAGCAATCC
GGATTCGAATATGAGCACTGGCTCCTCGCATAGCGAGAAGGATGTCAATG
ATATGCTGAGTGGCGGTGCAGCAACGCCAGGAGCTGCAGCAGCAGCGATT
CAACAGCAACATCCCGCCTTTGCGCCCACACTGGGAATGCAGCAACCACC
GCCGCCCCCACCTCAACACTCCAATAATGGAGGCGAGATGGGCTACTTGT
CGGCAGGCACGACCACGACGACGTCGGTGTTAACGGTAGGCAAGCCTCGG
ACGCCAGCGGAGCGGAAACGGAAGCGAAAAATGCCTCCATGTGCCACTAG
TGCGGATGAGGCGGGGAGTGGCGGTGGCTCTGGCGGAGCACGAGCAACCG
TTGTTAACAACAGCAGCCTGAAGGGCAAATCATTGGCCTTTCGTGATATG
CCAAAGGTAAACATGAGCCTGAATCTGGGCGATCGTCTGGGAGGATCTGC
AGGAAGCGGAGTAGAGCCGGTGGCGCCGGAGCGGGGGAGGTGGCGCTGGT
TCCGTTCTGGAAGCGGTGGCGGCAAAAGCGCCCGCCTGATGCTGCCAGTC
AGCGACACAGAGATCAACGACTATTCATTAAGCAGCAACGGGCGTGGGGC
GTCGTGTGCCAGGTGGTGCGGAAGCATTACGGCTGGTCTTTCAGGATCAC
ATACGGAGGGTGGCAGCAGTCTACCTATCGTCTAGCAACAGCAACGCGGC
AGACACCAGGATGCGGTGGTGTGGCAACGG

UFO09319.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:52:31
Subject Length Description Subject Range Query Range Score Percent Strand
tlk-RE 5537 CG34412-RE 193..1265 5..1068 4915 97.9 Plus
tlk-RC 5849 CG34412-RC 545..1577 45..1068 4730 97.9 Plus
tlk-RI 4673 CG34412-RI 377..1409 45..1068 4730 97.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:52:28
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 3781653..3782684 46..1068 4495 97.3 Plus
X 23542271 X 3724829..3724871 5..47 200 97.7 Plus
Blast to na_te.dros performed 2014-11-26 23:52:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2316..2545 102..331 465 68 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2576..2988 97..513 390 58.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6722..6951 102..328 387 66.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6758..7016 102..363 375 63 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2364..2781 102..513 367 59.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6791..7200 102..511 306 59.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6869..7112 102..351 218 59.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2336..2428 468..568 135 64.4 Plus

UFO09319.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:44:01 Download gff for UFO09319.5prime
Subject Subject Range Query Range Percent Splice Strand
tlk-RE 190..1279 1..1078 97 -> Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:05:04 Download gff for UFO09319.5prime
Subject Subject Range Query Range Percent Splice Strand
tlk-RE 190..1279 1..1078 97 -> Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:53:37 Download gff for UFO09319.5prime
Subject Subject Range Query Range Percent Splice Strand
tlk-RE 190..1279 1..1078 97 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:53:37 Download gff for UFO09319.5prime
Subject Subject Range Query Range Percent Splice Strand
X 3724826..3724871 1..47 93 -> Plus
X 3781655..3782698 48..1078 97 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:05:04 Download gff for UFO09319.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 3618859..3618904 1..47 93 -> Plus
arm_X 3675688..3676731 48..1078 97 -> Plus