UFO09327.5prime Sequence
1121 bp (1027 high quality bases) assembled on 2011-08-15
> UFO09327.5prime
CAGTCGACATGGATACCTTCAATGTACCTATGCTGGCGGAGAGCAGCAAC
ACCAACTATGCAACAGAAGCTACCAGCAATCATCACCACCTGCAACATCA
GCATCAGCAGCAACATTCACATCAGCAGCAGCAGCAGCAGCAACTCCTAA
TGCCCCATCATCACAAGGATCAAATGCTGGCGGCGGGCAGTTCGCCCATG
CTGCCATTCTATTCACACTTGCAGTTGCAACAGAAGGATGCAACTGCAAC
AATAGGACCTGCAGCAGCAGCAGCAGCAGTTGAGGCGGCAACAACATCGG
CAAATGCCGATAACTTCAGTTCATTGCAAACGATCGATGCCAGTCAACTG
GATGGAGGCATCTCCTTGAGCGGCTTGTGCGATCGTTTCTTTGTGGCCAG
TCCAAATCCCCACAGCAATAGCAACATGACACTAATGGGCACTGCCACAG
CTGCAACAACTACCACTACCAACAACAACAATAATAACAACACTAACAAT
AACAATAACAACAACGTGGAGGCTAAGACAGTGAGGCCATCGAACGGCAA
TTCGGTGATCATCGAATCTGTGACGATGCCATCGTTTGCCAATATTCTAT
TTCCCACCCATCGCAGCGCCAACGAGTGCATTGATCCCGCCCTGTTGCAA
AAGAATCCCCAAAATCCAAATGGCAACAACAGTAGCATAATTGTGCCGCC
CGTCGAATATCATCAATTGAAACCACTTGAAGTCAATTCGTCGACTTCCG
TTTCCACCAGCAACTTCCTGTCCTCCACAACGGCCCAATTGTTGGACTTT
GAGGTGCAGGTGGGCAAGGATGATGGCCACATTAGCACCACTACGACCAC
AGGGCCGGGCTCTGGATCGGCATCGGGTTCAGATCGGGATCGGGATCGGG
ATCAGGATCGATTGCACGCACATAGGCACTGCAACGCCCACAACGACAAC
ATCCATGAGCAACACTGCCAATCCGACGAGGAGCTCATTGCACAGTATTT
GAGGAGCTGGCGCCAGTTCCTGTGCTCCGAAAAGCAGCGTTCTCCACAGG
CAACCACACTTAGCAGTTTCAAGCAACATTCGTCACAGCAGCGACAGCAG
CAGCATTCCATGCAAGCGCCA
UFO09327.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:53:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ftz-f1-RB | 5407 | CG4059-RB | 1327..2433 | 9..1115 | 5100 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:53:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18797708..18798731 | 1030..9 | 4910 | 99.5 | Minus |
Blast to na_te.dros performed 2014-11-26 23:53:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2684 | 123..499 | 205 | 56.2 | Plus |
| Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3283..3354 | 239..310 | 135 | 65.3 | Plus |
UFO09327.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:44:05 Download gff for
UFO09327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ftz-f1-RB | 1321..2345 | 1..1025 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:05:20 Download gff for
UFO09327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ftz-f1-RB | 1321..2345 | 1..1025 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:53:49 Download gff for
UFO09327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ftz-f1-RB | 1321..2345 | 1..1025 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:53:49 Download gff for
UFO09327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18797713..18798737 | 1..1025 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:05:20 Download gff for
UFO09327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18790813..18791837 | 1..1025 | 99 | | Minus |
