UFO09332.5prime Sequence
1120 bp (1011 high quality bases) assembled on 2011-08-15
> UFO09332.5prime
CAGTCGACATGAACCCGTACAATAAGTTTCAAGATATGGTTTTAAAGCAA
TGGTTGGTCATGGATGATGCACTTTTCCAAGCATGTGGGTTTTGTCTAGT
TGCGGCATCTGATGACCAGTCGGTGTTTATCACTTGGGACAAGTATTATT
TGCTAAACATACGCTTTAAGATGCCAGAGGACAGCTGCAGGATAAAAATG
ACTGCTGTGCGAATTCCTGTGCCTAAAAGTGGAGGAGGCTATATTAGGAG
TGTGCATGCTTTGAGGTACAATACGATTCTGCATATGTCGAATGGGGAGT
TATACAGCTTTACCTCATTTAAGGCCCTGAATCTTATAAAATGGCTCAAT
GCAGTTCGTTGTTTAGCTATAGTCGATGTGGGATTCAGCGTGATTCGAAT
AGAGAATCGCCGACTGCTGCTGCAGACGTATGTTGATCTTCCTGATTGGG
AAAAGGACAAGTGTACACTGCAACATTCATTTGACATAACTTTTGACCAG
GAGAACATATTTCAGAGCGACTGGCAGCATAACGAATACACTCTGACAAC
TTTAAAAGTGACCGAAAAGGAAGAAGAGTTCGCACGAACTCTTTTCGGCA
CAAGAGCGGCAGAACAAAATTATATTCACATATTCAGCATAGGTGGACAT
GTATTTGCGTTGGCTTATAATTACAAAACAACATCAGATAGTACCGGTCC
TGACTATAATATCGAGCTCCTGTGCATTTATGCAGCGCACGTTAAATTCA
TTAAACTGCTACCAATGGAGAACCTTTGTTTGATTTTTCTCGGCTCTGGC
AGTATAGACATGTGGTACACGTCCAGGCTCCTTTCTATAAAACAGCGTCA
AATTTTCACACAGGTGCTGAATGGCTGGACTACGATGCAACAAGTGCCAA
TGGCGACGTCTATTACACAGACGGGAACCAGCTAGTGCGACTGCGATCAA
TACACGCCAGCTTGACGAGTGTTTTTGTCTACACTTGACGAAGCCAGTCT
CAGGATATACGCATCCTGTGGATAGAACAATAAAGAAAAATTGTTCTGGC
TTAACGACACCAACCACCTAAATTGCATTTCTTTGGTAGTCTGAATGTAC
GATCTAACGCTGGAAATTCA
UFO09332.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:53:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17490-RG | 2877 | CG17490-RG | 644..1766 | 8..1120 | 5005 | 97.2 | Plus |
| CG17490-RE | 2315 | CG17490-RE | 82..1204 | 8..1120 | 5005 | 97.2 | Plus |
| CG17490-RF | 2953 | CG17490-RF | 334..1146 | 318..1120 | 3440 | 96.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:53:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 22538311..22539393 | 8..1084 | 4760 | 97.4 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:53:27 has no hits.
UFO09332.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:44:08 Download gff for
UFO09332.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17490-RE | 15..1034 | 1..1014 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:05:30 Download gff for
UFO09332.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17490-RE | 75..1094 | 1..1014 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:53:58 Download gff for
UFO09332.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17490-RE | 75..1094 | 1..1014 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:53:58 Download gff for
UFO09332.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 22538304..22539323 | 1..1014 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:05:30 Download gff for
UFO09332.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 22431036..22432055 | 1..1014 | 98 | == | Plus |
