UFO09335.5prime Sequence
1101 bp (994 high quality bases) assembled on 2011-08-15
> UFO09335.5prime
CAGTCGACATGTCCTTCGCGGCTATGGCGAATACCAACACAGAAAAACTT
TACATGCAACTAAGCGCATCGGAATTATCAGCAATTATTATGAAAGATTC
ACCCAATTCCAACGACCGTGATGCGGGTTTTTGTTCCGCCAGTTCGGAAA
GCGAAGGCGGAGACGACTTGGTCGTCGAGCACGCGCGCAGTGGCAGTCCC
GACATCAGACCAAAAGGAACAGACTCGGCGGACTCCAAGCCAATAGCCCT
TGTCCGCAACAAACGCAAGAGTTCGGAACCCTTCAAAGTCGTAGGTTTGA
CGACTCCCAACTCTAAATCCATGCCTGGTCCTCCGTCCAGTGCGAGTATG
AATGCAACTGGTCCGCTAAAGAAACGCATACGATACACATCTTCCGCCGA
TTCGGCAGTTGTCCTAACGCCACCAGCCATAGACTCTCCACCGCCCAACA
GTTGCATACCTTCCACGTTGCGCCTGCAGCATGAAATAATGCCTAATCCG
GCACATATATATGTTCGCCATCCGGGAGTTACGACTCTTCACAGATCGCT
TGCTGCCCACCCAGAACAGCTGGAACCACTCGCATTAGTAACGACCAAAA
AGCAATGTGTCGACCAAGCGGGGCCTAAAATAGAGGCCTTTTCCGCATTG
CTAATTGGAAAACAGCCATCCGCCAAAAAAACGTTGAAGGAAAGGACGCA
AAAAGAATCAACGTCATCTTCCTTTTTAGAAGCTAGTCTTAGCGATGAGG
ATCTGAACAAGACGGGATTGGCACCAATTTCGCGACCTCATCAACATCAA
CGCAATTACAAGAATATGACTAGGGAGCGCCGCATTGAGGCGAACGCACG
TGAACGGACCCGTGTACACACCATATCCGCCGCCTACGAAACGCTCCGCC
AAGCTGTTCCAGCCTATGCCAGCACTCAAAAACTTCCAACTCTCCGTTCT
TCGGGTAGCGTGTTTCCTATATTACTAACCTTAAGGTAGAATGCCTGGCC
GAGGATAACAGCGCGATCATCCCGTAACGTTCATTGCCAGTGCCTAAAGC
CTGTACTTCAACAATCCTAAACGGAGGCAAAGTAACGAAGGAAGACAGGC
A
UFO09335.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:52:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| net-RC | 1662 | CG11450-RC | 281..1353 | 9..1081 | 4945 | 98 | Plus |
| net-RB | 2225 | CG11450-RB | 281..1353 | 9..1081 | 4945 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:52:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 83336..84279 | 1039..95 | 4320 | 98.5 | Minus |
| 2L | 23513712 | 2L | 87020..87107 | 96..9 | 440 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:52:48 has no hits.
UFO09335.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:44:03 Download gff for
UFO09335.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| net-RB | 271..1313 | 1..1046 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:05:12 Download gff for
UFO09335.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| net-RB | 276..1318 | 1..1046 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:53:45 Download gff for
UFO09335.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| net-RB | 276..1318 | 1..1046 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:53:45 Download gff for
UFO09335.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 83328..84277 | 97..1046 | 98 | <- | Minus |
| 2L | 87020..87112 | 1..96 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:05:12 Download gff for
UFO09335.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 83328..84277 | 97..1046 | 98 | <- | Minus |
| arm_2L | 87020..87112 | 1..96 | 95 | | Minus |
