UFO09336.5prime Sequence
315 bp (212 high quality bases) assembled on 2011-08-15
> UFO09336.5prime
CAGTCGACATGAAAGCAAGCTTATTTGAAGCTAAAATCGAACGTCTGGGG
CGTTCAGATTACGGACTTTCGGCCATCTTAGAGTGGAAATATGACACGAA
TGAGGAAACGATGGTTGAGGCACAAGCGTATCGCAGTAATTTCGGGGCGA
TGAGAGTGATTACAAGCTGCTACCCTGGGGCAATACCCAAACAGCCCTTT
CTATGATTACATCACCCCCTACTATAAGGAATGTGGTTCCCAAAAAACCT
CGGCTACTGGCTCCAATCTACCCCAAATACAAAAATAAATTTTAGCCTCC
CCTGGCCAAAAAAAC
UFO09336.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:52:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18536-RA | 788 | CG18536-RA | 277..571 | 9..310 | 1150 | 94.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:52:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18295091..18295199 | 9..115 | 480 | 98.2 | Plus |
2R | 25286936 | 2R | 18295253..18295433 | 113..301 | 460 | 91.5 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:52:53 has no hits.
UFO09336.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:44:04 Download gff for
UFO09336.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18536-RA | 273..575 | 4..315 | 92 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:05:15 Download gff for
UFO09336.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18536-RA | 273..575 | 4..315 | 92 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:53:46 Download gff for
UFO09336.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18536-RA | 273..575 | 4..315 | 92 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:53:46 Download gff for
UFO09336.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18295087..18295197 | 4..113 | 96 | -> | Plus |
2R | 18295254..18295445 | 114..315 | 91 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:05:15 Download gff for
UFO09336.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14182592..14182702 | 4..113 | 96 | -> | Plus |
arm_2R | 14182759..14182950 | 114..315 | 91 | | Plus |