Clone UFO09344 Report

Search the DGRC for UFO09344

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:93
Well:44
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO09344.5prime Sequence

1102 bp (1007 high quality bases) assembled on 2011-08-15

> UFO09344.5prime
CAGTCGACATGATGGCTGATTTGGTGAGCGGTGAAGCTTCTGAATCCGAC
GAGGAGCTGCAGGAGAAGAATAAGATTTTTGCTGCTGAAATTTCGGGCGA
AGCCTCCGAAGAGGATGATGAAGACATTTACGAGCAAGGCCGAAGCAGCA
ACCAGGTCAACAGCACGGCTTCCATTTACCGGAATAATCTGCTTCAGCGG
AAACTAATCGAAAACAACATTGCCATTTGGAGATCCCTTACCGCTTTCAC
TCGCAGCTTTGTGTTGAGTGCATCAAAGCAGCTCGTAACCACTGATCAAA
TGCTCATCAAGTCGCAACATAGTCTTCAGTCGGCTCACACATCCCTGCAG
CAGGCCCAGAAGAACGCCCAGGACCTGCAAAACAGGGTGGCTGATGTTAT
TACCAGCAACTTCCTCCCGCACATAAGCATCCAGAAGGCAACCGCAAGCT
TTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCAT
AATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATG
ACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCG
TTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAAC
AGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCAT
CGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCA
CAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCC
TTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCA
TATTGGCCACGTTTAATCAAACTGGTGAAACTCACCCAGGGATTGGCTGA
GACGAAAAACATATTCTCAATAAACCCTTTAGGAAATAGGCCAGGTTTTC
ACCGTACACGCACATCTTGCGATATATGTGTAGACTGCAGAATCGTCGTG
TATTCACTCAGAGCGATGAAACGTTTCAGTTGCTCATGAAACGCTAACAA
GGTGACCTTATCATATCACAGCTCACCGTCTTCATGCCATCGAATCCGAT
TG

UFO09344.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:54:08
Subject Length Description Subject Range Query Range Score Percent Strand
Blos3-RA 564 CG34255-RA 82..516 9..443 2175 100 Plus
Rad9-RA 1779 CG3945-RA 1337..1471 376..242 675 100 Minus
Rad9-RA 1779 CG3945-RA 1471..1519 57..9 245 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:54:06
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 18870614..18870849 208..443 1180 100 Plus
3L 28110227 3L 18870426..18870560 73..207 675 100 Plus
3L 28110227 3L 18870305..18870377 9..81 335 97.3 Plus
Blast to na_te.dros performed on 2014-11-26 23:54:07 has no hits.

UFO09344.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:44:14 Download gff for UFO09344.5prime
Subject Subject Range Query Range Percent Splice Strand
blos3-RA 46..492 1..451 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:05:51 Download gff for UFO09344.5prime
Subject Subject Range Query Range Percent Splice Strand
blos3-RA 76..522 1..451 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:54:15 Download gff for UFO09344.5prime
Subject Subject Range Query Range Percent Splice Strand
Blos3-RA 76..522 1..451 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:54:15 Download gff for UFO09344.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 18870614..18870849 208..443 100 == Plus
3L 18870299..18870370 1..74 94 -> Plus
3L 18870428..18870560 75..207 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:05:51 Download gff for UFO09344.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 18863399..18863470 1..74 94 -> Plus
arm_3L 18863528..18863660 75..207 100 -> Plus
arm_3L 18863714..18863949 208..443 100 == Plus