UFO09346.5prime Sequence
1103 bp (977 high quality bases) assembled on 2011-08-15
> UFO09346.5prime
CAGTCGACATGTGGGGCTATCATTTGCCAATTGTGCTGCGCCCAGCCAAC
AATATGACCATCACGAGCGGAGGCAACAGCTACAGTCCTCGAAACTCCGT
GGAAAACGACGCCTGGACGCTTGGTGAATCCTCCGAGTATGGTGAATATC
CCGATGACTACGATGAAAACGATGAGGAGCACGGCGATGAGGATATTGAC
TACGTTGGCCAGGAATCCGACGATGTTTTCGAAACGGAATCTGGAGAGGC
TGCAGTTCAGGGCGCACAGGCAAGCTTTCTAGACCATTCGTTTGGCGCGC
GGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCAC
AACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAAT
AAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTT
CTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATC
AAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAA
GCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATC
GCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGT
GAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAAC
TGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATA
AACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTG
CGAATATATGTGTAGAAACTGCCGGAAATCGTCGTGTATTCACTCCAGAG
CGATGAAACGTTTCAGTTTGCTCATGGAATCCGTGTACAAGGGTGAACAC
TATCCCATATCACCAGCTCACCGTCTTTCATTGCCATACGAATTCCGGAT
GAGCATTCATCAGCCGGCAAGAATGTGAAAAGGCCCGGAATAAAACTTGT
GCTTATTTTTTCTTTCCGTCTTTAAAGCCCGCATTATCCCAGCTGACGGT
CTGGTAATAGGTACATTGAAGCAACTGACTGAATGCCTTCAACTGTCTTT
ACC
UFO09346.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:53:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42671-RJ | 5900 | CG42671-RJ | 4478..4738 | 9..269 | 1305 | 100 | Plus |
| CG42671-RH | 4879 | CG42671-RH | 4334..4594 | 9..269 | 1305 | 100 | Plus |
| CG42671-RG | 4917 | CG42671-RG | 4372..4632 | 9..269 | 1305 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:53:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11229113..11229350 | 32..269 | 1190 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:53:32 has no hits.
UFO09346.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:44:09 Download gff for
UFO09346.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42671-RG | 4370..4637 | 1..269 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:05:32 Download gff for
UFO09346.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42671-RG | 4365..4632 | 1..269 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:53:59 Download gff for
UFO09346.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42671-RG | 4365..4632 | 1..269 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-27 00:53:59 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 16:05:32 has no hits.
