Clone UFO09347 Report

Search the DGRC for UFO09347

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:93
Well:47
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO09347.5prime Sequence

1110 bp (984 high quality bases) assembled on 2011-08-15

> UFO09347.5prime
CAGTCGACATGATGTTCCGCTCCGTGATCCCAGTTCTCCTGTTCCTGATC
CCGCTCCTGCTATCCGCCCAGGCCGCAAACTCGCTGCGGGCTTGTGGCCC
CGCCTTGATGGACATGCTGAGGGTTGCCTGTCCCAATGGATTCAATTCAA
TGTTCGCCAAACGAGGCACCTTGGGCCTATTCGATTATGAGGACCACTTG
GCGGATTTGGATAGCTCCGAATCTCACCACATGAACTCACTGTCGAGCAT
TCGGCGCGATTTTCGCGGCGTTGTCGACTCCTGTTGCCGCAAATCGTGTT
CCTTTTCCACGTTGAGGGCATACTGCGACTCCGCAAGCTTTCTAGACCAT
TCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCA
TAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTG
GATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAA
TCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAG
CGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGT
TGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATG
ATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAAT
ATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACG
TTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAA
CATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAAC
ACGCCACATCTTGCGATATATGTGTAGAAACTGCCCGGAAATCGTCGTGG
TATTCACTCCAGAGCGATGAAAACGTTTCAGTTTGCTCATGGAAAACGGT
GTAACAGGGTGAACACTATCCCCTATCACCAGCCTCACCGTCTTTCATGC
CATACGAAAATTCCGGATGAACCATTCATCAGCGGGCAGAAGTGTAATAA
AGCCCGAAAAAACCTGTGCTTATTTTCTTACGCCTCTAAAAGCCGTAATC
CACTTGAACG

UFO09347.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:53:38
Subject Length Description Subject Range Query Range Score Percent Strand
Ilp5-RA 478 CG33273-RA 25..348 9..332 1620 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:53:35
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 9823711..9823873 171..9 815 100 Minus
3L 28110227 3L 9823479..9823639 332..172 805 100 Minus
Blast to na_te.dros performed 2014-11-26 23:53:36
Subject Length Description Subject Range Query Range Score Percent Strand
transib1 2167 transib1 TRANSIB1 2167bp 232..289 901..958 127 72.9 Plus

UFO09347.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:44:10 Download gff for UFO09347.5prime
Subject Subject Range Query Range Percent Splice Strand
Ilp5-RA 18..351 1..336 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:05:35 Download gff for UFO09347.5prime
Subject Subject Range Query Range Percent Splice Strand
Ilp5-RA 18..351 1..336 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:54:01 Download gff for UFO09347.5prime
Subject Subject Range Query Range Percent Splice Strand
Ilp5-RA 18..351 1..336 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:54:01 Download gff for UFO09347.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 9823479..9823639 172..332 100 <- Minus
3L 9823711..9823878 1..171 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:05:35 Download gff for UFO09347.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 9816579..9816739 172..332 100 <- Minus
arm_3L 9816811..9816978 1..171 97   Minus