UFO09350.5prime Sequence
1120 bp (996 high quality bases) assembled on 2011-08-15
> UFO09350.5prime
CAGTCGACATGCCAGAAAGCCACAGTTACAAACTGAAACGTCTAACGTCA
ACAACAAGACAGCAAACTAATACCAAAATGGTCCTAAGCAATTCCACGCC
GAACAACCAGTCCAAGCACAACCAGATGGTAGTGGACACGGCAGCCATGA
ACAGTGATGATCTCAGCGAGCTACTGCAGCTGAACGCGGAGATCGAGGAA
CGTCGTCGCTCCAGCCGCCACGGAGATGCCAGCACCGCCTGTGGCCTGCT
CCGAGCTACGATGACCAGGGAGGAACTCTTCGAGATTTCCTCGCTGGATG
ATGATCGCTTCCTGACCGCCCTGGAGTACCAAAACTCGTTTGCATCACCG
CGCCGAGTGCAGGTTACCGACCTGGACTTGTCCAGCATCGAGAATCTGAT
GAAGTACTTCGACGAAGAGGTACCTGTGACGCCAACAAAGACACTGGGTA
CCACCAAGGCAGCGGGTAACACGGGTAAAGTGGCCAGCACAATTGCCAAG
TTGGCCCTCCAGTCGGATCCGGTCACGCCGCCCAAGCCAAAAGTGGGTAG
TGGCCACCTAAAGATCAGCGAGCTCAAGCAGAAATACGAACAGCTGCCGG
AGATGGAGACGCCACGCTCTGCATATCAGGCTTCCAGAAAGGTATCCGCG
TCGCTGCCCATGAAGGTCAAGGAGATGGCCCAGCTGTTTAACTCCAAGAT
CAGCCAGGTGATGCGACGTACAGAGGAACCACAGTATGTTCAGCTGCAAA
ATGAGATGTCGCCGGAGGTTAAGGCACAGAACCGCCTGGTGTCGCCATTA
GAGTCCCCAGTTCAAGGACCCTGCCTGGTGGCCGAGGAAGTTTTCCGCGA
GTTGAGCGTGAAGGACAAGCCCTGCTGTTCAACAGTTCATCGGTGACATG
GCAGCCAAGCACCCCAAGTTCACTGCACATGCCGCAGATCTCAGAGATGT
AAACAACAGGTGGCACAAGGGGGAGGTGGTGGCTGACCGACAGCCAGTGT
TTAGCATCTCGCCCAGGGGTTGGAAGCGAATGTATTCCTGGAGCCGGGAT
CCGCCACCGCGCGACAGTGGGTTTCTCTTCCCCCCAGACGCACTGATAGC
AAACGGAGACATGCACTCTC
UFO09350.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:54:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| slam-RB | 4117 | CG9506-RB | 407..1518 | 9..1116 | 5050 | 97.6 | Plus |
| slam-RC | 3704 | CG9506-RC | 1..1105 | 16..1116 | 5015 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:54:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6373508..6374619 | 9..1116 | 4750 | 97.1 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:54:34 has no hits.
UFO09350.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:44:18 Download gff for
UFO09350.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| slam-RB | 373..1494 | 1..1120 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:06:03 Download gff for
UFO09350.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| slam-RB | 400..1521 | 1..1120 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:54:24 Download gff for
UFO09350.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| slam-RB | 400..1521 | 1..1120 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:54:24 Download gff for
UFO09350.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6373501..6374622 | 1..1120 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:06:03 Download gff for
UFO09350.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6373501..6374622 | 1..1120 | 97 | | Plus |
