Clone UFO09351 Report

Search the DGRC for UFO09351

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:93
Well:51
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO09351.5prime Sequence

1127 bp (1006 high quality bases) assembled on 2011-08-15

> UFO09351.5prime
CAGTCGACATGCGCGCGTGTGTATGTGTTTGCGTGCAGTGCGAAATAGAA
ACAAGAAAAGCAAGCGAAAAATCACAGAAATTCACAAAAAAAAAGCCCAA
CTACTTCCAAAATTGGGCCGCCCGGCGAAGAACCGCAAAAGTGGCCAAAA
TTCGGCGAAAACAGCGCAAGTGTGACAAAGCATTCGTGCCGCTGCAGTCG
TCGGCGAAACGGGCGAAAACAAAAGAGAATAGTGTTGATAGTAATACGAG
CGTATTTAGCAGTAGCAGCAGCAGCAGCAGTGGCCGAAGCTTCGGCAGGG
GAACGGAACGGTGGGCGGTGGGTGCAGAAGCGGGCCGGGGAACGGCCGAG
AACGAAACACTAGCAGTAGCAGCAGCAGCAGCGACAACAACAAATGCCGG
TCGCTTTATCACCGCCGATCTAATCAAAACAGTTAACAGCGACAAGCAGC
GAGACAGAGTAGCAAAGGGCCACAGGGACGCGAAAAACCCCCTAGATGCC
ACCAAACATTTGCGCCTATCGGACTGCTTGCGTACCGTGCAAAAACTTGC
TATTGAACTTGAGAGCGCCGACGCCGGCAGCGACGCCAGCGCCCAAGCCA
ACGCTAGCGCCGACGCCAGCAGCGCCGTCATGTCCGAGACGGGTTGTCGG
CACTATCAAAGCTATGTGAAGGAGCACAGCTACGATACATTCCGGGTCAT
CGACGCCTACTTCGCTGCTTGCGTCAACAGAGATGCGCGCGAGCGAAAGG
CTATTCACTGCAACTGCTTCGAGTGCGGCAGCTACGGCATCCAGTTGTAC
GCTTGCCTGCACTGCATCTACTTCGGATGTCGGGGGGCCCACATCACGAG
TCACCTGCGATCCAAGAAGCACAATGTGGCCCTGGAGCTGTCCCACGGAA
CGCTCTACTGCTACGCCTGCAGAGATTTCATCTACGACGCGCGGAGTCGC
GAGTATGCGCTGATCAACCGCAGCTGGAGCGAATGATCTGCAGAAGAGCA
TCGGCTGGCTGCGTGGGTCCCACACCAGGAGACCAATCTGCTGCTGGCAT
GCCAGCGTCGGCTGGTGAGCCAATCAACGATCGAACTGGAGGTTGCTAAC
TGGGCCCCTGCTTCATGACTGCATCGT

UFO09351.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:54:41
Subject Length Description Subject Range Query Range Score Percent Strand
not-RC 2989 CG4166-RC 18..1156 9..1127 5145 97.7 Plus
not-RB 2488 CG4166-RB 18..1156 9..1127 5145 97.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:54:37
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 18621371..18622112 750..9 3710 100 Minus
3L 28110227 3L 18620528..18620834 1048..748 1225 97.1 Minus
Blast to na_te.dros performed 2014-11-26 23:54:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2341..2476 258..392 155 58.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2451 265..413 151 61.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2374 324..392 138 66.7 Plus
roo 9092 roo DM_ROO 9092bp 1120..1158 354..392 123 79.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2618..2657 354..393 119 77.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6842 356..479 119 62.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2488..2525 356..393 118 78.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2341..2377 356..392 113 78.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6739..6849 354..464 113 59.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6795..6831 356..392 113 78.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6760..6896 354..488 112 57.6 Plus

UFO09351.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:44:19 Download gff for UFO09351.5prime
Subject Subject Range Query Range Percent Splice Strand
not-RB 15..1114 1..1092 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:06:05 Download gff for UFO09351.5prime
Subject Subject Range Query Range Percent Splice Strand
not-RB 13..1112 1..1092 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:54:26 Download gff for UFO09351.5prime
Subject Subject Range Query Range Percent Splice Strand
not-RB 13..1112 1..1092 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:54:26 Download gff for UFO09351.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 18620479..18620832 750..1092 95 <- Minus
3L 18621372..18622117 1..749 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:06:05 Download gff for UFO09351.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 18613579..18613932 750..1092 95 <- Minus
arm_3L 18614472..18615217 1..749 99   Minus