Clone UFO09352 Report

Search the DGRC for UFO09352

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:93
Well:52
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO09352.5prime Sequence

1121 bp (1016 high quality bases) assembled on 2011-08-15

> UFO09352.5prime
CAGTCGACATGCGACCCTGGATCTTGACATCCTTCACCGGGGTGGGGACC
AACTTTTGCTCCGGGGTAGGAATGGCTGTGGCGGCGGCCACGGCCAGAGC
CAGGAATACGAACCTCGAACGCGACACCATGTATTTGCTTGTGAACTTCA
TCGTTGCGCTGGCCGTGCTGCAGGTGCAAGCCGGCTCATCCTACATTCCG
GACTCGGATCGCAACACACGCACCCTGCAGAACGATCTGCAGGTGGAGCG
GGATGGCAAGTATCGGTATGCCTACGAGACCTCCAATGGCATTTCCGCAT
CGCAGGAGGGATTGGGTGGCGTGGCCGTACAGGGCGGCAGTAGTTACACA
TCACCCGAGGGCGAAGTAATTAGTGTGAACTATGTGGCCGATGAGTTTGG
CTATCATCCCGTGGGCGCACATATACCCCAGGTGCCGGACTACATACTGC
GCTCCCTGGAGTACATTAGGACGCATCCCTACCAGATCAAGGACTACTAC
ACCGGGGAGCTGAAGACCGTGGAGCACGATGCAGCCGCCTTTAATGTGTA
CACACGCAACATTCAGGATCATACGATCCCCCAATCCCGACCGAGCACCA
CGCCCAAGACCATTTACCTCACCCATCCGCCCACGACCACGTCGCGACCT
CTGCGCCAAAGACGAGCTCTTCCGACGCACGCAAGCTTTCTAGACCATTC
GTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATA
ATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGA
TTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATC
CAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAGCGA
GCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGT
ATTCATTAGGCATTCTGCTGACATGCAGCATCACAAACGGCATGATGAAC
CTGATTCGCAGCGCATCAGCACTTGTCGCCTTGCGTATTATTATTGCCAT
GCTGAACGGGGCAAGAGTGTCATATTGGTCAGTTAATTCAAACTGGTGAA
TCTCTACTCCATGAATTGCCT

UFO09352.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:54:46
Subject Length Description Subject Range Query Range Score Percent Strand
Pcp-RA 718 CG3440-RA 19..585 114..680 2835 100 Plus
Jon99Fii-RA 913 CG2229-RA 34..138 113..9 525 100 Minus
Jon99Fi-RA 933 CG18030-RA 36..138 111..9 485 98.1 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:54:43
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7021798..7022337 141..680 2700 100 Plus
3R 32079331 3R 30487791..30487895 9..113 525 100 Plus
3R 32079331 3R 30488998..30489100 111..9 485 98.1 Minus
Blast to na_te.dros performed on 2014-11-26 23:54:44 has no hits.

UFO09352.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:44:19 Download gff for UFO09352.5prime
Subject Subject Range Query Range Percent Splice Strand
Pcp-RA 13..585 108..680 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:06:07 Download gff for UFO09352.5prime
Subject Subject Range Query Range Percent Splice Strand
Pcp-RA 13..585 108..680 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:54:28 Download gff for UFO09352.5prime
Subject Subject Range Query Range Percent Splice Strand
Pcp-RA 13..585 108..680 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:54:28 Download gff for UFO09352.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 7021694..7021726 108..140 93 -> Plus
2L 7021798..7022337 141..680 100 == Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:06:07 Download gff for UFO09352.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 7021694..7021726 108..140 93 -> Plus
arm_2L 7021798..7022337 141..680 100 == Plus