UFO09353.5prime Sequence
1076 bp (992 high quality bases) assembled on 2011-08-15
> UFO09353.5prime
CAGTCGACATGGACACAAAGCTCGCCTTCATTTCCGGACTCATCATGATC
CCCACGATATCAGGCGCCCTGACCTTCAATGCAACTCTAATATGTAGCTT
GGTGGTCAACGGAACCAAGATGAACGATCCTCGGGCGTGCAACGCGTGGA
TTCAGTGCATCGATGGGAGCCCTGTGAGTGGTAGCTGTGCGACTGGACTC
TTCTACGACCGGGAGAGCCAGAAATGCCTGAGTTCCAGTAGTATCAAGTG
TCTGTCCAGTGATCCGTGCGCTGCTCTGCCCACCGGATTCGCGGCTGATC
CGTACTCCTGCAATGGTTATTACTATTGCAAGGATGGCAAGGGGACGCAC
GGAGTGTGCAACACTGGGATGAATTTCAATTCGGGAACGCAGGACTGCAT
CCGCGATTTTCCGTGCTCGAATAAAATGGACCCGGATAGCTATTGCAACA
TCTTGCCGGATGGGGTCTTCGTCAAGGACACGGACAACTGCAATGGCTAT
CAGTTGTGCTGGGATGGCCAGGTGATCAATGGAACCTGTCCGGGCACCTT
CTACTTCAAGGCCTCCACGGCCCAGTGCGATTATCCGCAGAATGTGGAGT
GTGACTTCGTCCCAGTGCCAGATATTAGCAAGAAGGGTGTATGTCCAGAG
ACGGGTGGATTTATATCGGATAACAAGACCTGCAATGGCTACTACTACTG
CAAGGATTTGGGCAATGGAGAGTTCTCGCTGGAGCATGGCGTCTGCTCCG
ATGGAAGATTTTTCCTGGCCACCGATGGCGGAGCCTGTGTCCCGCGATCC
AAGGTGAAATGCGGCTACGATCGATGCGTGGGCTTGGGCAATTCCACCAT
TCAGCTGGCCAACGAGTCGATGATGGCTGCAGGGCTACTCGATCTGCCAG
GATGCATCGTCATTGGCCAAGGAACTTGTCCGCAGACGAGTACTTCGACG
AATACCCAACGGTGCACCACCCAGGTCATTATCATATACCGCCTGTTCGA
ATTCGGAGCAACACCGTGTCCAAGTTCCAAGTGGACCCACCACCACACAG
CACCATATTAGCCACCATTGCGTTCC
UFO09353.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:54:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6996-RC | 1828 | CG6996-RC | 87..1175 | 4..1076 | 4900 | 97.6 | Plus |
| CG6996-RB | 1377 | CG6996-RB | 87..1175 | 4..1076 | 4900 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:54:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20207867..20208909 | 12..1046 | 4640 | 98.1 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:54:49 has no hits.
UFO09353.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:44:20 Download gff for
UFO09353.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6996-RB | 91..1159 | 1..1056 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:06:09 Download gff for
UFO09353.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6996-RB | 84..1152 | 1..1056 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:54:29 Download gff for
UFO09353.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6996-RB | 84..1152 | 1..1056 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:54:29 Download gff for
UFO09353.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20207864..20208924 | 7..1056 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:06:09 Download gff for
UFO09353.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20200964..20202024 | 7..1056 | 97 | | Plus |
