Clone UFO09354 Report

Search the DGRC for UFO09354

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:93
Well:54
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO09354.5prime Sequence

1132 bp (1022 high quality bases) assembled on 2011-08-15

> UFO09354.5prime
CAGTCGACATGGGTTTATTACAAAAGTTGCGGAGGCAAATGTTGACAAGC
GTTAACCCCAGAAAGGTTGAAGGTCGAAAAACTATAAAGTTCAATCTCGT
TGCGAAAAGCAAAAGTCACTCGGGCATATCAGCACCCATCGGCCTTGGCC
CCCAGCTACCACCCCTTCCCCTCGGCGGCGGTTTTGTTAAGTTGCGTCAT
GTAGCCAAGGAGGAGGATACCAGTAGCAGCAGCAACACATCCTCCGCCAA
GGAATCGCCAGATAAGAAGGATCTTCGCCAGGAGCAGGCAGAAGCTTCGG
GAGACTCATCGCACCCAACGGCTCTGCCACAGTTTCTTCAAGGCGTCCAA
CGATCATCAACCGAGGTCATGGGCCCCGATCAGCGGTCTTTGGTGATTTC
GAAGACCGGCTCCATTGCGGAGCGTTTGGCGGCACTCCACAAAAGTGGCG
AGGACGACTGGAAGAAGCGCATCTCGAAGCGCGACGAAGTCGACGATGTG
CACCGTGAAAACTTCGTAAACGAATCGCTATCTTTGGCCCACTCGCTGTC
GGACAAACCACTGCCCCCATCACCTTTGATACCCACCAGCTTGGAGGGCG
GCAAGGTCTCCGATCGTTTGAGCAAACTCAAGTGCAACTCGGAGAACTGG
AAGCAGCGCATAGAGCAAACCGATGCCAAGAAATTCACAGTCGCCGGTCG
ACTGCAAAAGAAGGCCCAATCCCCCGTGGAGCTTCAATTCGAGCGTTCTG
CCAATGATGCGGCCAAAAAGTGTCCCATGCTGGAGGTGCGCAGCGCCAAT
CAGCCGCAGCTTGGGCTGGCCAAGAGCCCCTCCATGATGGTCACCTCTAG
CACCAGCACCAATAGCACCAGCAAGTCCGCACTCCGCAGCCTGAGCGTCA
ATCCCGAGGAGGAGGGACCCACCAGCCTGAGTCGCTCCAACAGCAGCAGT
TCGGAGTCCGATGGAGAGCGCAATCCCCCCAGATGCAGCAGACAGGAGCT
GGCAACAACAAGAGTGCTGCAGCCACCCACAATGTGGGGAGCCAGGGATT
CAGGTGCCCCGCCTGACGACAGAAACTTCAGAAACTCTCTCTCCTCAAGC
GGAAAGAGAGGAACGTCACTGATACCGCTCGA

UFO09354.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:54:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG45186-RZ 4447 CG45186-RZ 118..1113 91..1078 4650 98.5 Plus
CG45186-RAE 14937 CG45186-RE 10609..11603 92..1078 4645 98.5 Plus
CG45186-RY 4738 CG45186-RY 410..1404 92..1078 4645 98.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:54:52
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 2495217..2495625 662..1065 1585 96.4 Plus
3L 28110227 3L 2484564..2484839 92..367 1380 100 Plus
3L 28110227 3L 2485071..2485229 364..522 795 100 Plus
3L 28110227 3L 2495011..2495152 522..663 710 100 Plus
3L 28110227 3L 2480744..2480812 23..91 345 100 Plus
Blast to na_te.dros performed on 2014-11-26 23:54:54 has no hits.

UFO09354.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:44:21 Download gff for UFO09354.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33232-RA 1..1066 22..1078 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:06:11 Download gff for UFO09354.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33232-RA 1..1066 22..1078 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:54:30 Download gff for UFO09354.5prime
Subject Subject Range Query Range Percent Splice Strand
CG45186-RZ 115..1113 86..1078 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:54:30 Download gff for UFO09354.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 2495219..2495641 664..1078 96   Plus
3L 2484564..2484837 92..365 100 -> Plus
3L 2485073..2485228 366..521 100 -> Plus
3L 2495011..2495152 522..663 100 -> Plus
3L 2480742..2480812 20..91 98 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:06:11 Download gff for UFO09354.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 2480742..2480812 20..91 98 -> Plus
arm_3L 2484564..2484837 92..365 100 -> Plus
arm_3L 2485073..2485228 366..521 100 -> Plus
arm_3L 2495011..2495152 522..663 100 -> Plus
arm_3L 2495219..2495641 664..1078 96   Plus