Clone UFO09358 Report

Search the DGRC for UFO09358

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:93
Well:58
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO09358.5prime Sequence

1066 bp (967 high quality bases) assembled on 2011-08-15

> UFO09358.5prime
CAGTCGACATGGCGAATAAGTGCCGCTGCGGTGCAGAGGTCCTGGGCGGA
GAAAACAGAGGTGTTTTCTGCGAGGGTCCCTTGCTGGATGCTGTCCAGAG
ATCGAAAATGTTTCCCGACTGCAAACACTTTGTGGACATGAGCTGCATTT
TTACACCTGCCCAAACTTTGGCCGACTTCGATATGTTCACCAATTGCCGC
AGAAACGATGGATCTCTAAGGTTCCTGCAAATGTTTGTCGAGAAGCACTT
CAATGATCCTGGCTCGGAGCTGGAACACTGGACACCGCCGGATTGGAAAG
CACAGCCTTCGTTTCTTGCCAGGATCTCTGACCCGGAAATAAAGCAGTTC
GGTTCGGATGTCAATGGACTTTGGAAGGAGTTGGGGCGGCGGATTAAGGA
TGAAGTCAAGGAGAACCCCGATCAGTATTCCATTATCTACGTACCGAATC
CTTTCATTGTTCCCTCCTCAAATTGCCGCGAGTACCGCTACTGGGAATCG
TTTTGGATCATTCGCGGCTTGCTGCAATGTGGCATGCATCAAACAGCCCG
GGGCATGATCGATAACTATTTGGAATTGGTTCAGCAGTACGGCTTTGTGC
CTGGTTGTGGCCGGATATACTGCTCGGGTCGATCGAACCCTCCACTCTTG
ATCATGATGGTAAAGGCATATGTGGAGGTGACCAAGGACGAGCAGTACGC
CATTGAAGCTTTGCCGCTGCTGGAAACCGAATACGATACCCTTCATCAGC
AAGCACTCGGTGCAAGTGAAGGGCAGGACCATGTATCAGTATCGGGATTC
CTCGGCAGGACCCAGGCCCGATGCCCTATCGAGAAGATCTGGAGTGTGTG
GCAAGCTCCAGAGTCCTGTGGTCCGAGAGGGTTATGTACACCGAACTCAT
GTCGGCTGCTGAATCGGGAACGAACTTTCAGTCAACGCTGGTATGTGACC
GTCGAATGTTCCAATTAAGGATTCCTTTTCAAGAACTCCAAATACTTCTG
CCATTGGTGCCCGGTGGAGATCTGACATTGCATTTGTTCCCGGAAATGGC
AAGATCTCTGTGCCTG

UFO09358.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:54:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG6262-RA 3398 CG6262-RA 124..1158 9..1056 4595 96.8 Plus
CG6262-RB 3417 CG6262-RB 124..1177 9..1056 4395 95 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:54:15
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 16360241..16360969 241..972 3265 98 Plus
2R 25286936 2R 16359969..16360154 57..242 930 100 Plus
2R 25286936 2R 16359853..16359902 9..58 250 100 Plus
Blast to na_te.dros performed on 2014-11-26 23:54:16 has no hits.

UFO09358.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:44:15 Download gff for UFO09358.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6262-RA 116..1089 1..978 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:05:54 Download gff for UFO09358.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6262-RA 116..1089 1..978 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:54:19 Download gff for UFO09358.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6262-RA 116..1089 1..978 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:54:19 Download gff for UFO09358.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 16359845..16359902 1..58 93 -> Plus
2R 16359971..16360154 59..242 100 -> Plus
2R 16360243..16360967 243..970 97 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:05:54 Download gff for UFO09358.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 12247350..12247407 1..58 93 -> Plus
arm_2R 12247476..12247659 59..242 100 -> Plus
arm_2R 12247748..12248472 243..970 97 -> Plus