UFO09358.5prime Sequence
1066 bp (967 high quality bases) assembled on 2011-08-15
> UFO09358.5prime
CAGTCGACATGGCGAATAAGTGCCGCTGCGGTGCAGAGGTCCTGGGCGGA
GAAAACAGAGGTGTTTTCTGCGAGGGTCCCTTGCTGGATGCTGTCCAGAG
ATCGAAAATGTTTCCCGACTGCAAACACTTTGTGGACATGAGCTGCATTT
TTACACCTGCCCAAACTTTGGCCGACTTCGATATGTTCACCAATTGCCGC
AGAAACGATGGATCTCTAAGGTTCCTGCAAATGTTTGTCGAGAAGCACTT
CAATGATCCTGGCTCGGAGCTGGAACACTGGACACCGCCGGATTGGAAAG
CACAGCCTTCGTTTCTTGCCAGGATCTCTGACCCGGAAATAAAGCAGTTC
GGTTCGGATGTCAATGGACTTTGGAAGGAGTTGGGGCGGCGGATTAAGGA
TGAAGTCAAGGAGAACCCCGATCAGTATTCCATTATCTACGTACCGAATC
CTTTCATTGTTCCCTCCTCAAATTGCCGCGAGTACCGCTACTGGGAATCG
TTTTGGATCATTCGCGGCTTGCTGCAATGTGGCATGCATCAAACAGCCCG
GGGCATGATCGATAACTATTTGGAATTGGTTCAGCAGTACGGCTTTGTGC
CTGGTTGTGGCCGGATATACTGCTCGGGTCGATCGAACCCTCCACTCTTG
ATCATGATGGTAAAGGCATATGTGGAGGTGACCAAGGACGAGCAGTACGC
CATTGAAGCTTTGCCGCTGCTGGAAACCGAATACGATACCCTTCATCAGC
AAGCACTCGGTGCAAGTGAAGGGCAGGACCATGTATCAGTATCGGGATTC
CTCGGCAGGACCCAGGCCCGATGCCCTATCGAGAAGATCTGGAGTGTGTG
GCAAGCTCCAGAGTCCTGTGGTCCGAGAGGGTTATGTACACCGAACTCAT
GTCGGCTGCTGAATCGGGAACGAACTTTCAGTCAACGCTGGTATGTGACC
GTCGAATGTTCCAATTAAGGATTCCTTTTCAAGAACTCCAAATACTTCTG
CCATTGGTGCCCGGTGGAGATCTGACATTGCATTTGTTCCCGGAAATGGC
AAGATCTCTGTGCCTG
UFO09358.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:54:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6262-RA | 3398 | CG6262-RA | 124..1158 | 9..1056 | 4595 | 96.8 | Plus |
CG6262-RB | 3417 | CG6262-RB | 124..1177 | 9..1056 | 4395 | 95 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:54:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 16360241..16360969 | 241..972 | 3265 | 98 | Plus |
2R | 25286936 | 2R | 16359969..16360154 | 57..242 | 930 | 100 | Plus |
2R | 25286936 | 2R | 16359853..16359902 | 9..58 | 250 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:54:16 has no hits.
UFO09358.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:44:15 Download gff for
UFO09358.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6262-RA | 116..1089 | 1..978 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:05:54 Download gff for
UFO09358.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6262-RA | 116..1089 | 1..978 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:54:19 Download gff for
UFO09358.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6262-RA | 116..1089 | 1..978 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:54:19 Download gff for
UFO09358.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16359845..16359902 | 1..58 | 93 | -> | Plus |
2R | 16359971..16360154 | 59..242 | 100 | -> | Plus |
2R | 16360243..16360967 | 243..970 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:05:54 Download gff for
UFO09358.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 12247350..12247407 | 1..58 | 93 | -> | Plus |
arm_2R | 12247476..12247659 | 59..242 | 100 | -> | Plus |
arm_2R | 12247748..12248472 | 243..970 | 97 | -> | Plus |