Clone UFO09360 Report

Search the DGRC for UFO09360

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:93
Well:60
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO09360.5prime Sequence

1057 bp (858 high quality bases) assembled on 2011-08-15

> UFO09360.5prime
CAATCCACATGCCTTTCCGGGCCGAACACGAGGCATAGGACGAGAAGGTG
CAGATCACAGGTCCGGAGGACAACCAACACCAACAAAACAACAACAACAA
CGATTGGGAGCCGAACAGGATGGTGCTACCGTTTGGACTTGGACCCGATG
GCCATCACGTGGATGCCATTCAGAGTGCTCCGGCGCCCAGTGCGCCCCCC
GCCCACATGATGCCACCAGCCTACGCCCGGGGACAAACAAACATATACAC
AGGTGTTCCGATCATCGTGAATCCCTACATAGACTTCATCGTGGTCAACG
GGGATGATCGATACATGATCAGATGCGAACGAAAGTCGGTACTCGAGCGG
AGCGTGGAGCTGGCCAAGCTTATCCACGCCGGTCCGAACAGCGGTCGCAA
GAGCGACAATCATTTCCAGATACTCAACGTGGACAAGAACGACTTCGAGC
TGATCGTCCGCTACATGGAGAAGCACTTCATTCCCTACCGCGATCACAAG
CACCTGCTCAAGATACTGGAGCTATCCGATCGCTTCAACGTTCCAGATCT
GATAATCTACTGCATTCGCGAACTTGATCTCAGAATCTCGAGCGCCACGG
CACTGGACATCTTCAAGGCGCTGTGGTTCTACCAGGGCATCGCACTGACC
AACCAGCACCAAACGGTGATCACCACCCAGGAGACGGGCCAGCAGCTGGC
CAGGAAGAATGCGACCAAGGCGAAGGCGGCGGCCAAGCAGCTGGCGGCTG
CCAAGGCCTCTCAGTCCACCGAAAACGGATCGGAGGGCGATGGAGCCCAG
CAGAACCTCATTCCTAACCCACATCCCTATACAACGAAGATTACGGCGTG
ACGCTGCTGCACTACACGCTCCAGCTGATCGATATGCGCGCAGAGCTGCA
GCTTTCGATGCCGGAGATCAGTGATCTCAGGGTTCTAGGACCTGGAGACG
CTGGTCAGAGGGATACCATGCAGCTCAGGTCGGAAGTCACTTCTGGTTCC
ATGGCCTGGCACGTGGAGCCTGGGAAGTGTCCGCTACATATCTATGCCAA
CCCGGGA

UFO09360.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:54:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG8398-RE 1911 CG8398-RE 328..1321 30..1023 4565 97.6 Plus
CG8398-RD 2094 CG8398-RD 511..1504 30..1023 4565 97.6 Plus
CG8398-RC 1850 CG8398-RC 267..1260 30..1023 4565 97.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:54:23
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 6616075..6616600 30..555 2600 99.6 Plus
3L 28110227 3L 6616666..6617107 551..991 1870 96.4 Plus
Blast to na_te.dros performed on 2014-11-26 23:54:25 has no hits.

UFO09360.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:44:17 Download gff for UFO09360.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8398-RD 505..1490 23..1010 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:05:58 Download gff for UFO09360.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8398-RC 261..1246 23..1010 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:54:22 Download gff for UFO09360.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8398-RC 261..1246 23..1010 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:54:22 Download gff for UFO09360.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 6609382..6609404 9..29 91 -> Plus
3L 6616075..6616596 30..551 99 -> Plus
3L 6616667..6617107 552..991 96 == Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:05:58 Download gff for UFO09360.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6602482..6602504 9..29 91 -> Plus
arm_3L 6609175..6609696 30..551 99 -> Plus
arm_3L 6609767..6610207 552..991 96 == Plus