UFO09362.5prime Sequence
1131 bp (1029 high quality bases) assembled on 2011-08-15
> UFO09362.5prime
CAGTCGACATGATTTCGGAGATCTCTACACAATCGCGAGCAAAATTCCCT
TTAGACAAGCAGAAAATGGCACGGTACTTAGCGCAAATCATCATTTTGGG
TGCCCAGCTGGTTGGCCGGGCGCTGGTAAAGACGATGCGCCAGGAGCTGC
AGGCCTTCGAGGATGCGGCACGCCTTCAGGAAACGCTAAAGGCCAACGAT
CCCAACAGCGGCAGGAGTGCGGTGGCCAAGACAATGACCCTGGCGGAGGC
CCAGCAGATTCTCGATGTGAGTGACCTTACCAACCGCCAAGCGATAGATA
CGCACTACCAGCACTTGTTTCGTGTGAACGACAAATCCACCGGCGGTAGC
TTCTACATTCAGTCGAAAGTCTTTCGGGCCAAGGAGCGAATCGATCAGGA
ACTGGAACGGACGGAGCTGTTGGTCAAGACCGACGACTCCCATTCAATCC
TACCAACGCCACCGGAATCCTCGCAATTCCAATGCGAGAACAAAGAGCCG
GGTCAGAAGAGCCGAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGC
CCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACT
AGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAA
AACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGA
GGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAAT
TACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCAT
TCTGCCGACATGGAAAGCCATCACAAACGGCATGATGAACCTGAATCGCC
AGCGGCATCAGCACCTTGTCGCCTTGCGTATATATTTGCCCATGGTGAAA
ACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGT
GAAACTCCACCCAGGGATTGGCCTGAACGAAAACATATCTCAATAAACCT
TTAGGAAATAGGCCAGGTTTCACGTAACACCGCCACATCTTGCCGAAATA
TATGGTGTACACTGCCGAATCGTCTTGGTAATTCATCCGAGCCATGAAAA
CGTTCAGCTTTCTATGAACGGGTTAACACAG
UFO09362.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:55:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1409-RB | 622 | CG1409-RB | 1..507 | 9..515 | 2490 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:55:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7858173..7858679 | 9..515 | 2490 | 99.4 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:55:29 has no hits.
UFO09362.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:44:24 Download gff for
UFO09362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1409-RB | 1..515 | 9..523 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:06:25 Download gff for
UFO09362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1409-RB | 1..515 | 9..523 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:54:43 Download gff for
UFO09362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1409-RB | 1..515 | 9..523 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:54:43 Download gff for
UFO09362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7858167..7858679 | 1..515 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:06:25 Download gff for
UFO09362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7752200..7752712 | 1..515 | 98 | == | Plus |
